Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K02
(406 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.33
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.33
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 3.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.0
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 3.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 5.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 5.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 5.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 5.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 5.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 5.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 5.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.3
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 0.33
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 223 HQEEAL*GRAQLMKALTQDMSPQGAHRT*TESPPHS 116
H+EE L ++ + A+ ++ Q AH + +E HS
Sbjct: 585 HREEDLGSESKTINAVVNALAEQAAHASASEESVHS 620
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.33
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 223 HQEEAL*GRAQLMKALTQDMSPQGAHRT*TESPPHS 116
H+EE L ++ + A+ ++ Q AH + +E HS
Sbjct: 553 HREEDLGSESKTINAVVNALAEQAAHASASEESVHS 588
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE +DRT
Sbjct: 52 NEREYRKYRETSKERSQDRT 71
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE +DRT
Sbjct: 52 NEREYRKYRETSKERSQDRT 71
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYQKYRETSKERSRDRT 71
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 51 NEREYRKYRETSKERSRDRT 70
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 258 SQRPDAQSRETAKENEEDRT 317
++R + RET+KE DRT
Sbjct: 52 NEREYRKYRETSKERSRDRT 71
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = -3
Query: 341 LYWILRLARPVLFVFFCCFSTLGVWPLT 258
L WI P ++ F+ L W LT
Sbjct: 347 LGWINSAINPFIYAFYSADFRLAFWRLT 374
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 60 RETSKERSRDRT 71
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 60 RETSKERSRDRT 71
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 282 RETSKERSRDRT 293
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 293 RETSKERSRDRT 304
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 293 RETSKERSRDRT 304
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 282 RETSKERSRDRT 293
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 293 RETSKERSRDRT 304
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 282 RETAKENEEDRT 317
RET+KE DRT
Sbjct: 293 RETSKERSRDRT 304
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,019
Number of Sequences: 438
Number of extensions: 1770
Number of successful extensions: 26
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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