BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J24
(163 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08362-1|CAA69649.1| 943|Drosophila melanogaster neurotransmitt... 26 6.2
U66460-1|AAC47292.1| 658|Drosophila melanogaster inebriated pro... 26 6.2
BT009955-1|AAQ22424.1| 943|Drosophila melanogaster RH37701p pro... 26 6.2
AY128432-1|AAM75025.1| 943|Drosophila melanogaster HL05815p pro... 26 6.2
AE014134-755|AAN10349.1| 658|Drosophila melanogaster CG15444-PA... 26 6.2
AE014134-754|AAO41160.1| 943|Drosophila melanogaster CG15444-PD... 26 6.2
AE014134-753|AAO41159.1| 943|Drosophila melanogaster CG15444-PC... 26 6.2
AE014134-752|AAF51001.1| 943|Drosophila melanogaster CG15444-PB... 26 6.2
>Y08362-1|CAA69649.1| 943|Drosophila melanogaster neurotransmitter
transporter protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
>U66460-1|AAC47292.1| 658|Drosophila melanogaster inebriated
protein.
Length = 658
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 140 VVSFLMSTYYSVIIGYSIYYFFTSFK 165
>BT009955-1|AAQ22424.1| 943|Drosophila melanogaster RH37701p
protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
>AY128432-1|AAM75025.1| 943|Drosophila melanogaster HL05815p
protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
>AE014134-755|AAN10349.1| 658|Drosophila melanogaster CG15444-PA,
isoform A protein.
Length = 658
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 140 VVSFLMSTYYSVIIGYSIYYFFTSFK 165
>AE014134-754|AAO41160.1| 943|Drosophila melanogaster CG15444-PD,
isoform D protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
>AE014134-753|AAO41159.1| 943|Drosophila melanogaster CG15444-PC,
isoform C protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
>AE014134-752|AAF51001.1| 943|Drosophila melanogaster CG15444-PB,
isoform B protein.
Length = 943
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 109 LINFINSTSCLPVAAHSFYIFFTAFK 32
+++F+ ST + +S Y FFT+FK
Sbjct: 425 VVSFLMSTYYSVIIGYSIYYFFTSFK 450
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,341,851
Number of Sequences: 53049
Number of extensions: 79198
Number of successful extensions: 155
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 24,988,368
effective HSP length: 34
effective length of database: 23,184,702
effective search space used: 440509338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -