Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_J22
         (186 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6 prot...    33   0.16 
M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6 prot...    33   0.16 
M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.                   33   0.16 
BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.         33   0.16 
BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6 pr...    33   0.16 
AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6 pr...    33   0.16 
J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.                   32   0.38 
BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6 pr...    32   0.38 

>X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.
          Length = 247

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 206 EYAKLLAKRMKEAKEKRQEQI 226


>BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6
           protein.
          Length = 218

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 177 EYAKLLAKRMKEAKEKRQEQI 197


>AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228


>J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R K++K +RQE+I
Sbjct: 208 EYAKLLAKRMKQAKEKRQEQI 228


>BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 9   DYAKLLAQRKKESKVRRQEEI 71
           +YAKLLA+R KE++ +RQE+I
Sbjct: 208 EYAKLLAKRMKEAREKRQEQI 228


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,474
Number of Sequences: 237096
Number of extensions: 161361
Number of successful extensions: 274
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)