Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J21
(241 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228 29 0.52
11_03_0010 - 8922361-8922375,8923888-8924610 28 0.92
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 28 0.92
06_03_0336 + 19671500-19672150,19672681-19673301 28 1.2
04_01_0599 + 7871933-7872004,7872696-7873168,7873257-7873334,787... 28 1.2
03_02_1000 + 13111912-13112572,13112616-13113172 28 1.2
10_07_0062 - 12499872-12501350 27 1.6
10_01_0256 - 2688172-2688786,2690779-2690857,2691567-2691652,269... 27 1.6
05_07_0304 + 29096274-29096762 27 1.6
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544... 27 1.6
02_01_0243 - 1601977-1602834,1602857-1603063 27 2.1
12_01_0181 + 1341829-1343022 27 2.8
04_03_0780 - 19550106-19550809,19550982-19551003 27 2.8
06_03_0028 + 15659824-15661266 26 3.7
04_01_0484 - 6352556-6352881,6352927-6353692 26 3.7
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 26 3.7
03_06_0596 + 34964109-34964189,34964286-34964481,34964567-349647... 26 4.9
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 26 4.9
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 25 6.5
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 25 6.5
07_03_0431 - 18152041-18152085,18152368-18152685,18152927-181534... 25 6.5
04_01_0353 - 4623910-4624812 25 6.5
01_06_0009 - 25535480-25535529,25536225-25536252,25536427-255364... 25 6.5
11_03_0112 - 10135052-10135168,10135712-10135795,10135879-101359... 25 8.5
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 25 8.5
03_05_0923 + 28848925-28849272,28849636-28849869,28849965-288501... 25 8.5
03_01_0030 + 290232-291020 25 8.5
02_05_1333 - 35761405-35761822,35762551-35763155 25 8.5
>03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228
Length = 628
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +2
Query: 53 INADMREAEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQP 208
+ + +++ KN G++ G+C C + S D+ + DDG+V++N+P
Sbjct: 244 LKSAIKKQRKNSGGVKLPFGLC--GCQEEGSRNFDEESMFDPDDGQVLDNEP 293
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 28.3 bits (60), Expect = 0.92
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 29 RIEEGMDQINADMREAEKNLSGMEKCCGICVL 124
++ +G QI MR AEK M+KC C+L
Sbjct: 131 KLVQGSRQIADSMRAAEKLGHTMDKCISTCIL 162
>05_06_0223 -
26525618-26526112,26526203-26526370,26526649-26527473,
26527898-26528004,26529701-26529767
Length = 553
Score = 28.3 bits (60), Expect = 0.92
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 185 RHRCLSTCRRLL*TMLPCCKEERRFRNISPCRTDFSRLRA 66
+H LS CR L+ +PC E+ + N+ C +A
Sbjct: 233 KHLDLSYCRELVYLKIPCLLEQLSYLNVDLCHLQMIESKA 272
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 42 VWIRSTRTCAKPRKICPAWRNVAESA 119
VW+R RTC R++ P ++VA +A
Sbjct: 388 VWLRVRRTCPLCRRVLPPRKSVAAAA 413
>04_01_0599 +
7871933-7872004,7872696-7873168,7873257-7873334,
7873446-7873665
Length = 280
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 113 ICVLPCNKGASFKEDDGTWK 172
I +P + A+FK DDG WK
Sbjct: 94 IATVPGSSAAAFKHDDGKWK 113
>03_02_1000 + 13111912-13112572,13112616-13113172
Length = 405
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 84 ICPAWRNVAESAFFLATREHR 146
+C WR VA FLA RE R
Sbjct: 38 VCKQWRRVAADPTFLAARERR 58
>10_07_0062 - 12499872-12501350
Length = 492
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 60 RTCAKPRKICPAWRNVAESAFFLATREHR 146
R+ + R +C AWR + FL HR
Sbjct: 161 RSVLRCRAVCTAWRRLTSDPAFLRAHHHR 189
>10_01_0256 -
2688172-2688786,2690779-2690857,2691567-2691652,
2693046-2693113,2695175-2695244,2696191-2696320,
2696924-2697906
Length = 676
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 69 AKPRKICPAWRNVAESAFFLATREHR 146
A+ +CP WR V A FL R HR
Sbjct: 35 ARASAVCPEWRRVVRDAAFL--RRHR 58
>05_07_0304 + 29096274-29096762
Length = 162
Score = 27.5 bits (58), Expect = 1.6
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 57 TRTCAKPRKICPAWRNVAESAFFLATRE 140
+++ + R +C +WR + +FLA R+
Sbjct: 14 SKSVVRYRAVCRSWRRITSCPYFLAARD 41
>01_05_0474 -
22552599-22552687,22553494-22553631,22553766-22554447,
22555120-22555167,22555395-22556042,22556960-22557310,
22558622-22558690
Length = 674
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 3 TRCEQNNWTESRKVWIRSTRTCAKPRKICPAWRNVAESAFFLATREHRLKKTT 161
T+C NNWTE + + +R A+P W+ V S F E +++T+
Sbjct: 321 TQCGLNNWTEEQDMALRKAYFTARPSP--NFWKKV--SKMFSLLTETAVRQTS 369
>02_01_0243 - 1601977-1602834,1602857-1603063
Length = 354
Score = 27.1 bits (57), Expect = 2.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 78 RKICPAWRNVAESAFFLATREHR 146
R +C +WR + +A+F+A R
Sbjct: 22 RAVCRSWRRITTTAYFVAAHSRR 44
>12_01_0181 + 1341829-1343022
Length = 397
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 78 RKICPAWRNVAESAFFLATREHR 146
R +C AWR+V FL T R
Sbjct: 42 RAVCKAWRDVTSDRAFLLTHHRR 64
>04_03_0780 - 19550106-19550809,19550982-19551003
Length = 241
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 10 VNRTIGQNRGRYGSDQRGHARSREKSVRHGEMLRNLRSSLQQG 138
V TIG+ R +D +GH +S GE R ++ QG
Sbjct: 95 VRTTIGRASKRGTNDNKGHKSRSYQSTAIGEQYRKSSTTAMQG 137
>06_03_0028 + 15659824-15661266
Length = 480
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 203 GCSPLCRHRCLSTCRRLL*TMLP 135
GC PL R RCL+ +L LP
Sbjct: 233 GCDPLPRRRCLARASKLFRRPLP 255
>04_01_0484 - 6352556-6352881,6352927-6353692
Length = 363
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 42 VWIRSTRTCAKP----RKICPAWRNVAESAFFLATREHRLKKT 158
VW R KP R++C AWR + + FL T HR + T
Sbjct: 22 VWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLT-HHRHQPT 63
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = +2
Query: 134 KGASFKEDDG-TWKGNDDG 187
KG S KE TW GNDDG
Sbjct: 590 KGKSLKETGRHTWSGNDDG 608
>03_06_0596 +
34964109-34964189,34964286-34964481,34964567-34964775,
34964868-34964970,34965053-34965227,34965617-34965883,
34965966-34966311,34966396-34966533,34966645-34966770,
34966866-34967078,34967171-34967462,34967559-34967755,
34967844-34968194,34968290-34968874
Length = 1092
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 134 CCKEERR--FRNISPCRTDFSRLRACPR 57
C + ERR +N C+T F RL+ C R
Sbjct: 69 CYEYERREGTQNCPQCKTRFKRLKGCAR 96
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 125 PCNKGASFKEDDGTWKGNDDGKVVNN 202
P N+GA +DG K N DG +N
Sbjct: 776 PSNEGAEVFNEDGPGKSNKDGPEEHN 801
>09_06_0320 -
22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 151 FKRCSLVARKNADSATFLHAGQIFLGFAHVRVDLIHTFLDSVQLFC 14
+K CS A K++ + LH G++ +GF R L D V + C
Sbjct: 245 WKECS-DAIKSSTGSIVLHLGKLPIGFCKHRSLLFKMLADKVNVPC 289
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 17 EQLDRIEEGMDQINADMREAEKNLSGME 100
E+L+ IEE DQI + R+ ++ +S +E
Sbjct: 193 EKLEVIEERSDQIIQESRKVQETISSIE 220
>07_03_0431 -
18152041-18152085,18152368-18152685,18152927-18153482,
18153886-18154577,18155234-18155614,18156159-18156241,
18156618-18156786,18157498-18157543,18158301-18158389,
18158476-18158591,18159137-18159443
Length = 933
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 29 RIEEGMDQINADM-REAEKNLSGMEKCCGICVLPCNKGA-SFKEDDGTWKGNDDGKVVNN 202
R+EE I A M R K+ + M+ G VL K +F++D WK DG+ V
Sbjct: 78 RVEEEQRNIRAWMDRAVVKSCAQMDG--GTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQE 135
Query: 203 QPQRV 217
+++
Sbjct: 136 AHEKL 140
>04_01_0353 - 4623910-4624812
Length = 300
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 19 TIGQNRGRYGSDQRGHARSREKSVRHGEMLRNLRSSLQQGSIXXXXXXXXXXXXXXXSGE 198
T G RGR +++ GH + + HG R++ SL +G E
Sbjct: 177 TRGYGRGRSAAEEVGHGDAGSTARGHGRG-RSIDGSLGRGGSATEEVKDGDAGSTARDHE 235
Query: 199 QPTSKGDG 222
+ S G+G
Sbjct: 236 RGGSTGNG 243
>01_06_0009 -
25535480-25535529,25536225-25536252,25536427-25536496,
25537020-25537063,25538064-25538228,25538411-25538491,
25539224-25540258
Length = 490
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 39 KVWIR-STRTCAKPRKICPAWRNVAESAFFL 128
+++IR +T A+ + +C AW + FF+
Sbjct: 2 EIFIRLPAKTLARFKSVCKAWHTIISEPFFI 32
>11_03_0112 -
10135052-10135168,10135712-10135795,10135879-10135953,
10137801-10137978,10138048-10138212,10138291-10138337,
10140233-10140301,10140531-10140629,10141256-10141375,
10141459-10141581,10149251-10149364,10150725-10150913,
10151058-10151110,10151365-10151470,10151957-10152085
Length = 555
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 45 WIRSTRTCAKPRKICPAW 98
W ++ CAKP+K C W
Sbjct: 34 WKKARDCCAKPKKRCVDW 51
>11_01_0334 +
2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 41 GMDQIN-ADMREAEKNLSGMEKCCGI 115
GM+++ A +REAEKNL ME +
Sbjct: 852 GMNKVTPAQIREAEKNLKFMESMINV 877
>03_05_0923 +
28848925-28849272,28849636-28849869,28849965-28850131,
28850433-28850651,28850743-28850929,28851012-28851063,
28851158-28851387,28851619-28851717,28851835-28852565,
28853004-28853519,28854140-28854398
Length = 1013
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 229 AFVHHPLRLVVHHFAVIVAFPRAVVFFKRCSLVARKNADSATFL 98
A + P RL+ +H V++ FP +V + V + A +A +L
Sbjct: 209 AVLTRPFRLMSNHLGVVLTFPVYLVDLPNDTAVEDRVAATAGYL 252
>03_01_0030 + 290232-291020
Length = 262
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 203 GCSPLCRHRC 174
GCSP CR RC
Sbjct: 136 GCSPYCRSRC 145
>02_05_1333 - 35761405-35761822,35762551-35763155
Length = 340
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 200 CSPLCRHRCLSTCRRLL*TMLPCCKEERRFRNI 102
CSP C+ CL L + C E+++ +N+
Sbjct: 293 CSPTCKGLCLGCGENLNTSSCSCNAEKQQAKNV 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,411,005
Number of Sequences: 37544
Number of extensions: 145091
Number of successful extensions: 464
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 58
effective length of database: 12,615,796
effective search space used: 264931716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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