Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J21
(241 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical ... 82 6e-17
AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical ... 82 6e-17
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 32 0.062
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 31 0.11
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 31 0.11
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 31 0.11
U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily ass... 31 0.14
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 0.44
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 29 0.44
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 0.44
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 0.58
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 0.58
U41104-4|AAK67239.1| 388|Caenorhabditis elegans Nuclear hormone... 28 0.77
AF083231-1|AAD03689.1| 388|Caenorhabditis elegans nuclear recep... 28 0.77
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 28 1.0
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 1.0
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 1.0
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 1.0
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 27 1.8
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 27 1.8
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 2.3
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 2.3
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 2.3
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 2.3
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 26 3.1
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 26 3.1
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 26 3.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 26 4.1
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 25 5.4
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 25 5.4
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 25 5.4
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 25 5.4
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 25 5.4
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 25 5.4
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 25 5.4
Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical pr... 25 7.2
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 25 7.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 25 7.2
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 25 7.2
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 25 7.2
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 25 9.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 25 9.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 25 9.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 25 9.5
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 25 9.5
AF025471-5|AAB71064.2| 334|Caenorhabditis elegans Serpentine re... 25 9.5
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 25 9.5
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 25 9.5
>AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical
protein Y22F5A.3b protein.
Length = 234
Score = 81.8 bits (193), Expect = 6e-17
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 17 EQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDD--GTWKGNDDGK 190
EQL+R E +D IN DM+EAE +L GMEKCCG+CVLP NK F++ + WK +DDG
Sbjct: 82 EQLERCEGALDTINQDMKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDGG 141
Query: 191 VVNNQPQ 211
V+++QP+
Sbjct: 142 VISDQPR 148
>AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical
protein Y22F5A.3a protein.
Length = 207
Score = 81.8 bits (193), Expect = 6e-17
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +2
Query: 17 EQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCNKGASFKEDD--GTWKGNDDGK 190
EQL+R E +D IN DM+EAE +L GMEKCCG+CVLP NK F++ + WK +DDG
Sbjct: 55 EQLERCEGALDTINQDMKEAEDHLKGMEKCCGLCVLPWNKTDDFEKTEFAKAWKKDDDGG 114
Query: 191 VVNNQPQ 211
V+++QP+
Sbjct: 115 VISDQPR 121
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 0.062
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 218 SPFEVGCSPLCRHR---CLSTCRRLL*TMLPCCKEERRFRNISPCRTDFSRLRACP 60
+P EV C+P C H C S C + + C ++ + C T +R+R CP
Sbjct: 413 TPKEVSCNP-CAHEKYSCGSECDGMFSCGIHHCTKKCHDKECGECETGANRIRTCP 467
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.11
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 230 CVRPSPFEVGCSPLCRHRCLSTC 162
CV P+P V C P C+ +C C
Sbjct: 140 CVAPAPVTVQCVPQCQQKCTQQC 162
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 360 QCIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPCLTQSVNSCSCQQNYSPC 410
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.11
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 230 CVRPSPFEVGCSPLCRHRCLSTC 162
CV P+P V C P C+ +C C
Sbjct: 141 CVAPAPVTVQCVPQCQQKCTQQC 163
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 361 QCIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPCLTQSVNSCSCQQNYSPC 411
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 240 PIPLRSSITL*GWLFTT-LPSSLPFHVPSSSL 148
PIP RSS+ G+L LPSSLPF + ++L
Sbjct: 433 PIPSRSSVPTPGYLTQEPLPSSLPFQIDKTTL 464
>U41268-1|AAA82433.2| 234|Caenorhabditis elegans Temporarily
assigned gene nameprotein 81 protein.
Length = 234
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 17 EQLDRIEEGMDQINADMREAEKNLSGMEKCCG 112
EQLD+IE + + D+ N++ ME CG
Sbjct: 73 EQLDKIEANLSNVIDDLNVVSHNITAMEHYCG 104
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.1 bits (62), Expect = 0.44
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 200 CSPLCRHRCLSTCRRLL*TMLPC 132
C P+C+ C +TC++ ++PC
Sbjct: 327 CQPICQQTCQNTCQQAAQIVVPC 349
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+CV+ + C+P C C +C +PC E +N SPC
Sbjct: 280 QCVQQQQPMIQCAPACTQSCSQSCSIAQPAQMPCMTESINSCSCQQNYSPC 330
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+CV+ + C+P C C +C +PC E +N SPC
Sbjct: 500 QCVQQQQPMIQCAPACTQSCSQSCSIAQPAQMPCMTESINSCSCQQNYSPC 550
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 41 GMDQINADMREAEK-NLSGMEKCCGICVLPCNK 136
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 41 GMDQINADMREAEK-NLSGMEKCCGICVLPCNK 136
G D IN D+ E + L+G CC C L C++
Sbjct: 1210 GEDHINQDIYECKTCGLTGSLCCCSECALTCHR 1242
>U41104-4|AAK67239.1| 388|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 16 protein.
Length = 388
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 198 FTTLPSSLPFHVPSSSLNDAPLL 130
F + PSSL H+PSS N P+L
Sbjct: 112 FPSPPSSLMLHIPSSYSNQMPIL 134
>AF083231-1|AAD03689.1| 388|Caenorhabditis elegans nuclear receptor
NHR-16 protein.
Length = 388
Score = 28.3 bits (60), Expect = 0.77
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 198 FTTLPSSLPFHVPSSSLNDAPLL 130
F + PSSL H+PSS N P+L
Sbjct: 112 FPSPPSSLMLHIPSSYSNQMPIL 134
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -3
Query: 239 RYRCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRFRNISPCRTDFS 78
R C S V C P C+ C STC ++PC N C T +S
Sbjct: 235 RSTCSSTSTLSV-CIPACQQTCRSTCSTAKTFVIPCTSGTS--GNSCSCSTGYS 285
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTC 162
P+P V C P+C+ +C STC
Sbjct: 127 PAPV-VQCQPMCQQQCQSTC 145
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 239 RYRCVRPSPFEVGCSPLCRHRCLSTC 162
R +C + +P C P+C+ +C S C
Sbjct: 89 RQQC-QSAPAVSQCQPMCQQQCQSQC 113
Score = 24.6 bits (51), Expect = 9.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 209 EVGCSPLCRHRCLSTC 162
+V C P C+ +C S+C
Sbjct: 190 QVQCQPACQQQCQSSC 205
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTC 162
P+P V C P+C+ +C STC
Sbjct: 127 PAPV-VQCQPMCQQQCQSTC 145
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 239 RYRCVRPSPFEVGCSPLCRHRCLSTC 162
R +C + +P C P+C+ +C S C
Sbjct: 89 RQQC-QSAPAVSQCQPMCQQQCQSQC 113
Score = 24.6 bits (51), Expect = 9.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 209 EVGCSPLCRHRCLSTC 162
+V C P C+ +C S+C
Sbjct: 190 QVQCQPACQQQCQSSC 205
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTC 162
P+P V C P+C+ +C STC
Sbjct: 126 PAPV-VQCQPMCQQQCQSTC 144
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/52 (21%), Positives = 22/52 (42%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRFRNISPCRTDFS 78
+CV+ C C+ C S+C+ C + + +N C+ ++S
Sbjct: 326 QCVQQQQPAAQCQSACQDSCSSSCQAAQPATTACQQSPQSPQNSCSCQANYS 377
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 35 EEGMDQINADMREAEKNLSGMEK 103
EE ++NADMREAE+ L+ K
Sbjct: 55 EESKKRLNADMREAEEALAKARK 77
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 15 QNNWTESRKVWIRSTRTCAKPRKICPAWRN 104
Q W ES KVW+R +R A R+ C A N
Sbjct: 1151 QAQWVESWKVWLRISRGLA--RQGCAAMAN 1178
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 15 QNNWTESRKVWIRSTRTCAKPRKICPAWRN 104
Q W ES KVW+R +R A R+ C A N
Sbjct: 1151 QAQWVESWKVWLRISRGLA--RQGCAAMAN 1178
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 276 QCIQQQQPMQQCAPACTQSCYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPC 326
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 276 QCIQQQQPMQQCAPACTQSCYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPC 326
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 276 QCIQQQQPMQQCAPACTQSCYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPC 326
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+C++ C+P C C +C +PC + +N SPC
Sbjct: 276 QCIQQQQPMQQCAPACTQSCYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPC 326
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 122 ERRFRNISPCRTDFSRLRACPR*SDPYLPRFCPIVLFTPR 3
ER N P SR P +DPYLP+F TP+
Sbjct: 484 ERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQ 523
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 122 ERRFRNISPCRTDFSRLRACPR*SDPYLPRFCPIVLFTPR 3
ER N P SR P +DPYLP+F TP+
Sbjct: 484 ERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQ 523
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 122 ERRFRNISPCRTDFSRLRACPR*SDPYLPRFCPIVLFTPR 3
ER N P SR P +DPYLP+F TP+
Sbjct: 484 ERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTPQ 523
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 230 CVRPSPFEVGCSPLCRHRCLSTC 162
CV +P V C P C+ +C C
Sbjct: 141 CVVQTPAAVQCVPQCQQQCQQQC 163
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+CV+ C+P C C +C +PC + +N SPC
Sbjct: 366 QCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSVNSCSCQQNYSPC 416
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 230 CVRPSPFEVGCSPLCRHRCLSTC 162
CV +P V C P C+ +C C
Sbjct: 141 CVVQTPAPVQCVPQCQQQCQQQC 163
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = -3
Query: 233 RCVRPSPFEVGCSPLCRHRCLSTCRRLL*TMLPCCKEERRF----RNISPC 93
+CV+ C+P C C +C +PC + +N SPC
Sbjct: 366 QCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSVNSCSCQQNYSPC 416
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 1 ARGVNRTIGQNRGRYGSDQRGHARSREKSVRHGEMLRNLRSSLQ 132
+R R+ ++R R S R ++RSR S R RSSL+
Sbjct: 120 SRSSKRSRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLK 163
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 122 ERRFRNISPCRTDFSRLRACPR*SDPYLPRFCPIVLFTP 6
ER N P SR P +DPYLP+F TP
Sbjct: 388 ERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQSTQPTP 426
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -3
Query: 221 PSPFEVG--CSPLCRHRCLSTC 162
P+P EV C+P C +CL +C
Sbjct: 316 PTPVEVRALCTPTCMPQCLPSC 337
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 200 CSPLCRHRCLSTC 162
C C +RCLSTC
Sbjct: 270 CQSRCENRCLSTC 282
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 25.4 bits (53), Expect = 5.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTC 162
P P C P C +RC+ C
Sbjct: 112 PIPASQSCLPECENRCMQQC 131
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 131 NKGASFKEDDGTWKGNDDGKV-VNNQPQRV 217
++G S W GNDDG+V V N +RV
Sbjct: 875 DEGTSTAGQTTVWIGNDDGEVFVVNSTERV 904
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 200 CSPLCRHRCLSTC 162
C P+C+ +C STC
Sbjct: 137 CQPVCQQQCQSTC 149
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 200 CSPLCRHRCLSTC 162
C P+C+ +C STC
Sbjct: 137 CQPVCQQQCQSTC 149
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 200 CSPLCRHRCLSTC 162
C P+C+ +C STC
Sbjct: 137 CQPVCQQQCQSTC 149
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 200 CSPLCRHRCLSTC 162
C P+C+ +C STC
Sbjct: 137 CQPVCQQQCQSTC 149
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 9 CEQNNWTESRKVWIRSTRTCAK 74
C + + RKVW TRTC+K
Sbjct: 157 CGREFCFKCRKVWHEGTRTCSK 178
>Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical
protein F53C11.1 protein.
Length = 494
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 102 NVAESAFFLATREHRLKKTTARGKATMTAKW 194
+V ES FF A ++ +T GKA+ W
Sbjct: 91 DVGESVFFAAANNSKVYISTNSGKASFYFSW 121
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTCRRLL*TMLPCC 129
P+P C PLC C++ + T +P C
Sbjct: 345 PTPCAAQCMPLCESSCIARL-SCVQTCMPAC 374
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 209 EVGCSPLCRHRCLSTC 162
+ C P C RCL TC
Sbjct: 230 QANCIPQCMPRCLPTC 245
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 4 RGVNRTIGQNRGRYGSDQRGHARSREKS 87
RG +R+ ++RGR S R RSR++S
Sbjct: 105 RGRSRSRSRDRGRDRSRDRSRDRSRDRS 132
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 198 FTTLPSSLPFHVPSSSLND 142
F TLP S P V SSSL D
Sbjct: 5 FQTLPVSTPLPVSSSSLTD 23
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 198 FTTLPSSLPFHVPSSSLND 142
F TLP S P V SSSL D
Sbjct: 7 FQTLPVSTPLPVSSSSLTD 25
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 203 GCSPLCRHRCLSTCRRLL*TMLPCC 129
GC CR RC CRR CC
Sbjct: 85 GCC-CCRPRCCCCCRRCCTCCRTCC 108
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 149 KEDDGTWKGNDDGKVVNNQPQRVMDERN 232
K+ + KGND V P+ V+++RN
Sbjct: 99 KKKENKDKGNDSSAEVTKSPKGVVEKRN 126
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 203 GCSPLCRHRCLSTCRRLL*TMLPCC 129
GC CR RC CRR CC
Sbjct: 83 GCC-CCRPRCCCCCRRCCTCCRTCC 106
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 203 GCSPLCRHRCLSTCRRLL*TMLPCC 129
GC CR RC CRR CC
Sbjct: 84 GCC-CCRPRCCCCCRRCCTCCRTCC 107
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 203 GCSPLCRHRCLSTCRRLL*TMLPCC 129
GC CR RC CRR CC
Sbjct: 85 GCC-CCRPRCCCCCRRCCTCCRTCC 108
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 221 PSPFEVGCSPLCRHRCLSTC 162
PS + C+P C+ C S+C
Sbjct: 184 PSCVQSSCAPACQPMCSSSC 203
>AF025471-5|AAB71064.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein195 protein.
Length = 334
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 201 LFTTLPSSLPFHVPSSSLNDAPLLQGRTQIPQHF 100
L L S +PF VP ++ L Q +P+HF
Sbjct: 147 LLIVLLSVIPFLVPDQNIAVKKLFQNIPCLPKHF 180
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 67 ARSREKSVRHGEMLRNLRSSLQQGS 141
A +E S R EML+NL S+Q+ +
Sbjct: 843 AEKKELSDRLNEMLKNLNQSMQKSA 867
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 67 ARSREKSVRHGEMLRNLRSSLQQGS 141
A +E S R EML+NL S+Q+ +
Sbjct: 855 AEKKELSDRLNEMLKNLNQSMQKSA 879
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,175,477
Number of Sequences: 27780
Number of extensions: 121689
Number of successful extensions: 374
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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