Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J21
(241 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 2.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 2.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 20 3.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 20 3.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 20 3.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 3.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 3.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 20 4.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 19 6.4
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 19 6.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 6.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 19 6.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 8.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 19 8.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 8.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 19 8.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 8.5
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 2.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 66 CAKPRKICPAWRNVAESAFF 125
C+K + +CP+ N F+
Sbjct: 352 CSKLKGLCPSMANYDRGVFY 371
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 2.8
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 66 CAKPRKICPAWRNVAESAFF 125
C+K + +CP+ N F+
Sbjct: 442 CSKLKGLCPSMANYDRGVFY 461
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.2 bits (40), Expect = 3.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 55 QRGHARSREKSVRHGEMLRNLRSSLQQGSI 144
+R RSR+K R R + SSL I
Sbjct: 61 ERSKERSRDKRERERSKERKIISSLSNNYI 90
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.2 bits (40), Expect = 3.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 55 QRGHARSREKSVRHGEMLRNLRSSLQQGSI 144
+R RSR+K R R + SSL I
Sbjct: 61 ERSKERSRDKRERERSKERKIISSLSNNYI 90
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -2
Query: 222 SITL*GWLFTTLPSSLPFHVPSS 154
++TL ++ P+ LP H+P+S
Sbjct: 364 NVTLPTSTYSGSPTELPKHLPTS 386
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +1
Query: 52 DQRGHARSREKSVRHGEMLRNLRSSLQQGS 141
D+RG RSRE + + + + + G+
Sbjct: 317 DRRGRGRSREHRIIPSHYIEQIPAPVYYGN 346
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 42 VWIRSTRTCAKPRKICP 92
VW R+ RT P CP
Sbjct: 183 VWWRAVRTEEVPEDKCP 199
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 19.8 bits (39), Expect = 4.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 152 EDDGTWKGNDDGKVVNNQPQRVM 220
+DDG +DD + N +P M
Sbjct: 394 DDDGDDDDDDDVEAANGKPAEGM 416
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.4 bits (38), Expect = 6.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 72 KPRKICPAWRNVAESAFFLATREHRLKKTT 161
+P K P ++ +A LATREH + T
Sbjct: 329 RPLKKEPITQSNKRTAGNLATREHPSRNFT 358
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 19.4 bits (38), Expect = 6.4
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 17 EQLDRIEEGMDQINADM 67
+ +DR++ M Q+N +M
Sbjct: 479 DSVDRLDNLMAQVNTEM 495
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.4 bits (38), Expect = 6.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 202 PTSKGDGR 225
PT KGDGR
Sbjct: 202 PTLKGDGR 209
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 19.4 bits (38), Expect = 6.4
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = +2
Query: 50 QINADMREAEKNLSGMEKCCGICVLPCNKGASFK 151
++ +M + L E +C LPC G + K
Sbjct: 565 ELRLNMSAIQFKLGHPEPPESVCSLPCEVGQAKK 598
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.0 bits (37), Expect = 8.5
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 23 LDRIEEGMDQINADMREAEKNLSGM 97
LD + EG+ D+RE +G+
Sbjct: 273 LDSLPEGLFASTRDLREIHLAYNGL 297
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 19.0 bits (37), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 170 KGNDDGKVVNNQPQRVMDERNGIG 241
+GN + V N+ V R G+G
Sbjct: 30 RGNGNAIVSNSASNSVHGHREGLG 53
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.0 bits (37), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 70 RSREKSVRHGEMLRNLRSSLQQGSI 144
RSR+K+ R R + SSL I
Sbjct: 304 RSRDKTERERSKERKIISSLSNNYI 328
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 19.0 bits (37), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 170 KGNDDGKVVNNQPQRVMDERNGIG 241
+GN + V N+ V R G+G
Sbjct: 31 RGNGNAIVSNSASNSVHGHREGLG 54
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.0 bits (37), Expect = 8.5
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 98 EKCCGICVLPCNKG 139
E CG+ +PC+ G
Sbjct: 539 EHVCGVKGIPCSWG 552
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,620
Number of Sequences: 438
Number of extensions: 1536
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4024224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.6 bits)
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