Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_J20
         (152 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   7.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   7.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    18   9.9  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    18   9.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 79  PNFSFQFFIIYH 114
           PN  F+  +IYH
Sbjct: 663 PNMLFKDILIYH 674


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 79  PNFSFQFFIIYH 114
           PN  F+  +IYH
Sbjct: 663 PNMLFKDILIYH 674


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 89  EKFGLIIYTNK*N 51
           E F LIIY N  N
Sbjct: 207 EGFALIIYNNSDN 219


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 91  FQFFIIYHLVIPKTNQ 138
           F F ++Y  ++ KTN+
Sbjct: 730 FCFTVVYAALLTKTNR 745


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 3   TRVENCYXRYYKAD 44
           T + NC  + +KAD
Sbjct: 157 TGLGNCLTKIFKAD 170


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 3   TRVENCYXRYYKAD 44
           T + NC  + +KAD
Sbjct: 157 TGLGNCLTKIFKAD 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,239
Number of Sequences: 438
Number of extensions: 404
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)