Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J19
(273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 25 5.5
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 25 9.7
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 25 9.7
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 25 9.7
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 25 9.7
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 25 9.7
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 25 9.7
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 25 9.7
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 25 9.7
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 25 9.7
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 25 9.7
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 25 9.7
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 25 9.7
>Z83239-6|CAB05803.1| 324|Caenorhabditis elegans Hypothetical
protein T09F5.10 protein.
Length = 324
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = -2
Query: 122 SLFKGLNDHCRTRTHWSCRSRFQTHHCCRCPKSLMNCPP 6
S+ K + C H+ RS Q+ C R + C P
Sbjct: 252 SMLKDIKASCTEIAHYEMRSSQQSQDCFRWIAPFLKCKP 290
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 122 SLFKGLNDHCRTRTHWSCRSRFQTHHCCR 36
SL G+ HC+TR + CR H CR
Sbjct: 47 SLVCGMRYHCKTRKN-DCRIDSTERHFCR 74
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -2
Query: 98 HCRTRTHWSCRSRFQTHHCCRC 33
+C T+W R++ +TH+ C
Sbjct: 607 NCNNNTYWCLRTKNETHNFLYC 628
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 Y*KNVVNLFKKYVDLNYIS*KKLLVTMSSFL 233
Y ++N+ +KY D+N + L T SFL
Sbjct: 228 YNDGIINVLEKYFDMNKKQCRDALDTYKSFL 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,215,108
Number of Sequences: 27780
Number of extensions: 53028
Number of successful extensions: 99
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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