Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J17
(226 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 0.46
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 0.80
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 0.80
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 1.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 1.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 1.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 1.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 1.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 20 3.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 5.7
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 19 5.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 19 5.7
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 19 5.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 19 7.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 19 7.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 19 7.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 19 7.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.5
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 19 9.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 9.9
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 0.46
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYKGQI-NQVKE*AYPCNYTNSL 33
Y+ SN+ YN+ + N Y N K+ Y NY +
Sbjct: 322 YKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQI 361
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 0.80
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYK 90
Y N+N+ YN+ + N YK
Sbjct: 96 YNNNNYNNYNYNNNNYNNYK 115
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 0.80
Identities = 6/27 (22%), Positives = 17/27 (62%)
Frame = +3
Query: 39 ICVVTRVSSFFYLVYLAFVWINICGIM 119
IC++ ++ ++Y+AF+ + G++
Sbjct: 402 ICLIVVIALVSIIMYIAFIILQYAGLL 428
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 1.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 110 WHNGYKEENLN 142
WHN Y E+ LN
Sbjct: 350 WHNIYSEKGLN 360
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 1.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 110 WHNGYKEENLN 142
WHN Y E+ LN
Sbjct: 350 WHNIYSEKGLN 360
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 128 LYNHYATDINPYKGQINQVKE*AYPCNYTNSL 33
L N+Y ++I+ Y N K+ Y NY +
Sbjct: 85 LSNNYISNISNYNNNNNYNKKLYYNINYIEQI 116
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +2
Query: 116 NGYKEENLNFCSKEHVSKFSFINIHYV 196
N Y N+ + + +K + NI+Y+
Sbjct: 87 NNYISNISNYNNNNNYNKKLYYNINYI 113
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 128 LYNHYATDINPYKGQINQVKE*AYPCNYTNSL 33
L N+Y ++I+ Y N K+ Y NY +
Sbjct: 85 LSNNYISNISNYNNDNNYNKKLYYNINYIEQI 116
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 1.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 128 LYNHYATDINPYKGQINQVKE*AYPCNYTNSL 33
L N+Y ++I+ Y N K+ Y NY +
Sbjct: 323 LSNNYISNISNYNNNNNYNKKLYYNINYIEQI 354
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = +2
Query: 116 NGYKEENLNFCSKEHVSKFSFINIHYV 196
N Y N+ + + +K + NI+Y+
Sbjct: 325 NNYISNISNYNNNNNYNKKLYYNINYI 351
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.2 bits (40), Expect = 3.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYKGQINQVKE*AYP 54
Y+ SN+ YN+Y + YK I +++ P
Sbjct: 89 YKYSNYNNYNNYNKKLY-YKNYIINIEQIPVP 119
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.4 bits (38), Expect = 5.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 50 NYTNSLMPTYTKLIP 6
NY N+ +PT+ K P
Sbjct: 47 NYENNQLPTHGKGTP 61
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 154 LTTEIQIFLFITIMPQILI 98
L I F+F T +P ILI
Sbjct: 237 LQRNIGYFVFQTYLPSILI 255
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +2
Query: 113 HNGYKEENLNFCSKEHVSKFSFINIHYV 196
+N Y N N +K+ K INI +
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNYIINIEQI 357
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 149 YRNSNFPLYNHY 114
Y+ SN+ YN+Y
Sbjct: 322 YKYSNYNNYNNY 333
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 104 YLWHNGYKEENLNFCSKEHVSKFSFINIH 190
Y H G K +CSK K + +++H
Sbjct: 111 YRTHTGEKPYQCEYCSKSFSVKEN-LSVH 138
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYK 90
Y+ SN+ YN+ + N YK
Sbjct: 89 YKYSNYNNYNNNNYNNNNYK 108
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYK 90
Y+ SN+ YN+ + N YK
Sbjct: 89 YKYSNYNNYNNNNYNNNNYK 108
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYK 90
Y+ SN+ YN+ + N YK
Sbjct: 89 YKYSNYNNYNNNNYNNNNYK 108
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 149 YRNSNFPLYNHYATDINPYK 90
Y+ SN+ YN+ + N YK
Sbjct: 89 YKYSNYNNYNNNNYNNNNYK 108
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.0 bits (37), Expect = 7.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 128 LYNHYATDINPYKGQINQVKE*AYPCNY 45
L N+Y + N YK N + Y NY
Sbjct: 318 LSNNYNYNNNNYKYNYNNYNKKLYYKNY 345
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +3
Query: 21 VGRH*RICVVTRVSSFFYL 77
+G H +C +S+ F+L
Sbjct: 22 IGLHNNMCTSLNLSNLFWL 40
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 18.6 bits (36), Expect = 9.9
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +1
Query: 76 WFIWPLYG 99
W IWP+ G
Sbjct: 1020 WKIWPMKG 1027
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,917
Number of Sequences: 438
Number of extensions: 1334
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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