Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J12
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 221 2e-58
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 221 2e-58
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 221 2e-58
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 221 2e-58
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 47 8e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 47 8e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 44 4e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 7e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 7e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 42 2e-04
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 41 4e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 41 5e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 40 9e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 40 9e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.001
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.001
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.003
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.003
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.003
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 38 0.004
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 38 0.004
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 37 0.006
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.008
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 37 0.008
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 37 0.008
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.019
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.019
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.019
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.019
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.019
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 35 0.025
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 35 0.025
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 35 0.025
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 35 0.025
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 34 0.058
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 34 0.058
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 34 0.058
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 34 0.058
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 33 0.077
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 31 0.31
U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical pr... 31 0.31
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.31
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.31
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.31
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 0.31
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.54
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 31 0.54
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 0.54
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 31 0.54
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 31 0.54
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 30 0.72
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 30 0.95
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 30 0.95
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 30 0.95
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 29 2.2
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 29 2.2
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 2.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 2.2
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 28 2.9
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 28 2.9
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 3.8
EF445111-1|ABQ01578.1| 251|Caenorhabditis elegans scramblase 3 ... 28 3.8
AF078785-2|AAC27093.1| 266|Caenorhabditis elegans Hypothetical ... 28 3.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL110500-17|CAE18040.1| 190|Caenorhabditis elegans Hypothetical... 27 8.9
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 221 bits (541), Expect = 2e-58
Identities = 109/154 (70%), Positives = 124/154 (80%)
Frame = +2
Query: 8 VEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 187
++FFNQQMHL GLAQA GNP+L CQINLDKNFAF+EFRSIDETT MAFDGINF GQ LK
Sbjct: 201 LDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLK 260
Query: 188 IRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQL 367
+RRP DYQP T + +P +ST+V DS +KIFIGGLPNYL EDQVKELL SFG L
Sbjct: 261 VRRPRDYQPSQNTFDMNSRMP---VSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPL 317
Query: 368 RAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+AF+L DS G SKGYAFAEY+D ++TDQAIAG
Sbjct: 318 KAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 350
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 221 bits (541), Expect = 2e-58
Identities = 109/154 (70%), Positives = 124/154 (80%)
Frame = +2
Query: 8 VEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 187
++FFNQQMHL GLAQA GNP+L CQINLDKNFAF+EFRSIDETT MAFDGINF GQ LK
Sbjct: 201 LDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLK 260
Query: 188 IRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQL 367
+RRP DYQP T + +P +ST+V DS +KIFIGGLPNYL EDQVKELL SFG L
Sbjct: 261 VRRPRDYQPSQNTFDMNSRMP---VSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPL 317
Query: 368 RAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+AF+L DS G SKGYAFAEY+D ++TDQAIAG
Sbjct: 318 KAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 350
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 221 bits (541), Expect = 2e-58
Identities = 109/154 (70%), Positives = 124/154 (80%)
Frame = +2
Query: 8 VEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 187
++FFNQQMHL GLAQA GNP+L CQINLDKNFAF+EFRSIDETT MAFDGINF GQ LK
Sbjct: 176 LDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLK 235
Query: 188 IRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQL 367
+RRP DYQP T + +P +ST+V DS +KIFIGGLPNYL EDQVKELL SFG L
Sbjct: 236 VRRPRDYQPSQNTFDMNSRMP---VSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPL 292
Query: 368 RAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+AF+L DS G SKGYAFAEY+D ++TDQAIAG
Sbjct: 293 KAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 325
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 221 bits (541), Expect = 2e-58
Identities = 109/154 (70%), Positives = 124/154 (80%)
Frame = +2
Query: 8 VEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLK 187
++FFNQQMHL GLAQA GNP+L CQINLDKNFAF+EFRSIDETT MAFDGINF GQ LK
Sbjct: 179 LDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLK 238
Query: 188 IRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQL 367
+RRP DYQP T + +P +ST+V DS +KIFIGGLPNYL EDQVKELL SFG L
Sbjct: 239 VRRPRDYQPSQNTFDMNSRMP---VSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPL 295
Query: 368 RAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+AF+L DS G SKGYAFAEY+D ++TDQAIAG
Sbjct: 296 KAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 328
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P L E ++ L FG++ F ++KD TG+ KG AF Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Frame = +2
Query: 200 HDYQPMPGTENPAINV-PAGVISTVVPDSPH------KIFIGGLPNYLNEDQVKELLMSF 358
HD + +PG N A+ V PA S P SP K+FIG L +ED+V+ L +F
Sbjct: 91 HDQKTLPGM-NRAMQVKPADTDSR--PASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
Query: 359 GQLRAFNLVKDSSTGLSKGYAFAEY---VDISMTDQAIAG 469
G+L +++ + G SKG AF +Y +D M A+ G
Sbjct: 148 GELDEVTVLR-GADGASKGCAFVKYKHGLDAHMAISALHG 186
Score = 30.3 bits (65), Expect = 0.72
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+FI LP + ++ ++ FG + + + D +T SK + F Y +I + AI
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAI 487
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 46.8 bits (106), Expect = 8e-06
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
I+IGGL L+E V + +G++ NL++D TG SKG+AF Y D T A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAV 96
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P L E ++ L FG++ F ++KD TG+ KG AF Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Frame = +2
Query: 200 HDYQPMPGTENPAINV-PAGVISTVVPDSPH------KIFIGGLPNYLNEDQVKELLMSF 358
HD + +PG N A+ V PA S P SP K+FIG L +ED+V+ L +F
Sbjct: 91 HDQKTLPGM-NRAMQVKPADTDSR--PASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
Query: 359 GQLRAFNLVKDSSTGLSKGYAFAEY---VDISMTDQAIAG 469
G+L +++ + G SKG AF +Y +D M A+ G
Sbjct: 148 GELDEVTVLR-GADGASKGCAFVKYKHGLDAHMAISALHG 186
Score = 30.3 bits (65), Expect = 0.72
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+FI LP + ++ ++ FG + + + D +T SK + F Y +I + AI
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAI 487
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +2
Query: 281 SPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
S +F+G + ++ED ++ + G + + +V D TG KGY F E+ DI + A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 461 I 463
I
Sbjct: 76 I 76
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 272 VPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYV 436
+ +S + I LP + +++V+ L S G++ + LV+D TG S GY F YV
Sbjct: 37 IGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYV 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++ G+P + +++ + FGQ+ ++ D+ TGLSKG F + D AI
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 263 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDI 442
+++ P++ KIF+GGL + +D ++E FG++ +++D +T S+G+ F +
Sbjct: 15 ASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Query: 443 SMTDQAI 463
+ D A+
Sbjct: 75 TEVDAAM 81
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 263 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDI 442
+++ P++ KIF+GGL + +D ++E FG++ +++D +T S+G+ F +
Sbjct: 15 ASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Query: 443 SMTDQAI 463
+ D A+
Sbjct: 75 TEVDAAM 81
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 263 STVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDI 442
+++ P++ KIF+GGL + +D ++E FG++ +++D +T S+G+ F +
Sbjct: 15 ASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Query: 443 SMTDQAI 463
+ D A+
Sbjct: 75 TEVDAAM 81
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +2
Query: 212 PMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD 391
P+ G E +N + S D P K+FIGGL + +++ FG++ +++D
Sbjct: 21 PVDGHEEARLNADSDDGSHGSQD-PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
Query: 392 SSTGLSKGYAFAEYVDISMTDQAI 463
+T ++G+ F +VD S D+ +
Sbjct: 80 PATKRARGFGFITFVDPSSVDKVL 103
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 134 TTQAMAFDGINFKGQSL--KIRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGG 307
T +A F I F S K+ +++ +P + P + +V + K+FIGG
Sbjct: 82 TKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTK-KVFIGG 140
Query: 308 LPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
L + +K+ ++G++ L+ D +T +G+ F + + D+
Sbjct: 141 LSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +2
Query: 212 PMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD 391
P+ G E +N + S D P K+FIGGL + +++ FG++ +++D
Sbjct: 21 PVDGHEEARLNADSDDGSHGSQD-PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
Query: 392 SSTGLSKGYAFAEYVDISMTDQAI 463
+T ++G+ F +VD S D+ +
Sbjct: 80 PATKRARGFGFITFVDPSSVDKVL 103
Score = 31.5 bits (68), Expect = 0.31
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 134 TTQAMAFDGINFKGQSL--KIRRPHDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGG 307
T +A F I F S K+ +++ +P + P + +V + K+FIGG
Sbjct: 82 TKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTK-KVFIGG 140
Query: 308 LPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
L + +K+ ++G++ L+ D +T +G+ F + + D+
Sbjct: 141 LSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
KIF+GGLP + ++ + E FG + ++ D +T S+GY F D + ++A
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERA 92
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = +2
Query: 212 PMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD 391
P P E PA PAG H+I++G +P + ED + L G++ L+ D
Sbjct: 184 PPPDWEGPATG-PAG--------QGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMD 234
Query: 392 SSTGLSKGYAFAEY 433
+G S+GYAF Y
Sbjct: 235 PMSGASRGYAFVTY 248
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+F+G L ++ + +K FG++ +++D T SKGY F + + + AIAG
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 39.9 bits (89), Expect = 9e-04
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 299 IGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIA 466
+ LP +NED++++L G++ + +D TGL KG+AF + +AIA
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+G L + ++ +++E FG + +++D++T SKGY F Y ++AI
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+G L + ++ +++E FG + +++D++T SKGY F Y ++AI
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+G L + ++ +++E FG + +++D++T SKGY F Y ++AI
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
Score = 33.9 bits (74), Expect = 0.058
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
D P +++G L + + ED + L G + ++ D G + YAF E+ D Q
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQ 99
Query: 458 AI 463
A+
Sbjct: 100 AL 101
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+G L + ++ +++E FG + +++D++T SKGY F Y ++AI
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.9 bits (89), Expect = 9e-04
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+G L + ++ +++E + FG++ +++D++T KGY F Y ++AI
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
PD + +FI LP + + FG + + + D T LSK + F Y +
Sbjct: 496 PDGAN-LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Query: 455 QAIA 466
AI+
Sbjct: 555 NAIS 558
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
PD + +FI LP + + FG + + + D T LSK + F Y +
Sbjct: 496 PDGAN-LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Query: 455 QAIA 466
AI+
Sbjct: 555 NAIS 558
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
PD + +FI LP + + FG + + + D T LSK + F Y +
Sbjct: 425 PDGAN-LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 483
Query: 455 QAIA 466
AI+
Sbjct: 484 NAIS 487
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKG 415
+++D G S+G
Sbjct: 173 VLRDQD-GKSRG 183
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
K+F+G +P NE + L +G + + N+++D ST SKG F +
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFN 379
H+ + + G +P PA + + K+FIG L NE+ ++E+ FG + +
Sbjct: 117 HNIKVIEGMHHPVQMKPADTENR----NERKLFIGQLSKKHNEENLREIFAKFGHIEDCS 172
Query: 380 LVKDSSTGLSKGYAFAEYVDIS 445
+++D G S+G AF + + S
Sbjct: 173 VLRDQD-GKSRGCAFVTFTNRS 193
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
PD + +FI LP + + FG + + + D T LSK + F Y +
Sbjct: 496 PDGAN-LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 554
Query: 455 QAIA 466
AI+
Sbjct: 555 NAIS 558
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++G P E+++ S GQ+ +V D TG +G+AF E+ + +A+
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYV 436
++F+ LP ED ++ L +G++ +V D TG KG+A E+V
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFV 328
Score = 32.3 bits (70), Expect = 0.18
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIA 466
++ + LP+ E Q+++ +GQ+ +L K + G +G+AF ++D A+A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASL-KYTKEGKFRGFAFVGFLDEGSASNALA 61
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMS-FGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIA 466
IF+G LP + ED + + G + A +V+D TG KG+AF + S A++
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALS 306
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+I++G + + ED ++ FG +++ N+ D +TG K +AF EY
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 KNFAFLEFRSIDETTQAM-AFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTV 271
K FAF+E+ + A + +G G++LK+ +Q M +N P +I V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMM-FQEMRLPQNMPQAQP--IIDMV 199
Query: 272 VPDSPH--KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDIS 445
D+ ++++ + L+E +K + +FG++ L + + +G+ + E+ +++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 446 MTDQAIAG 469
+AIAG
Sbjct: 260 SQSEAIAG 267
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+I++G + + ED ++ FG +++ N+ D +TG K +AF EY
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 KNFAFLEFRSIDETTQAM-AFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTV 271
K FAF+E+ + A + +G G++LK+ +Q M +N P +I V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMM-FQEMRLPQNMPQAQP--IIDMV 199
Query: 272 VPDSPH--KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDIS 445
D+ ++++ + L+E +K + +FG++ L + + +G+ + E+ +++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 446 MTDQAIAG 469
+AIAG
Sbjct: 260 SQSEAIAG 267
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+I++G + + ED ++ FG +++ N+ D +TG K +AF EY
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +2
Query: 95 KNFAFLEFRSIDETTQAM-AFDGINFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTV 271
K FAF+E+ + A + +G G++LK+ +Q M +N P +I V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMM-FQEMRLPQNMPQAQP--IIDMV 199
Query: 272 VPDSPH--KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDIS 445
D+ ++++ + L+E +K + +FG++ L + + +G+ + E+ +++
Sbjct: 200 QKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 446 MTDQAIAG 469
+AIAG
Sbjct: 260 SQSEAIAG 267
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 284 PHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
P++IF+GG P E +++E F ++ +VK S G SKGY F +
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 113
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 284 PHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
P++IF+GG P E +++E F ++ +VK S G SKGY F +
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 114
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
P S ++I GL N+D ++E+ +G + + + D +T KGY F ++
Sbjct: 77 PLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 136
Query: 455 QAIAG 469
A+ G
Sbjct: 137 AAVDG 141
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+ + ED V + +G+++ +L D TG KGYA EY ++AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.008
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +2
Query: 200 HDYQPMPGTENPAINVP------AGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFG 361
HD P+ + + +P A P S + G +PN N+D ++E+ +G
Sbjct: 73 HDSTPLSSVSSRRVPLPPTSQHRASSNFNTTPSSTNLYIRGLMPN-TNDDLLREMCSKYG 131
Query: 362 QLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAIAG 469
+ + + D +T KGY F ++ A+ G
Sbjct: 132 NIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 167
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
KIF+GG+ +N + + +G++ + D + G S+G+AF E+
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 33.5 bits (73), Expect = 0.077
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
K+F+GGLP+ +E ++ FG++ D T + +AF + + D+A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
KIF+GG+ +N + + +G++ + D + G S+G+AF E+
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 33.5 bits (73), Expect = 0.077
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
K+F+GGLP+ +E ++ FG++ D T + +AF + + D+A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 281 SPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
S +++G P ED + G + +V D TG +G+AF E+ + + +A
Sbjct: 2 SGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 461 I 463
+
Sbjct: 62 V 62
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.019
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQ-LRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
IF+G L ++E + + +FG L+ +++D +G SKG+AF + +D A+
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.019
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQ-LRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
IF+G L ++E + + +FG L+ +++D +G SKG+AF + +D A+
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
P K+FIGGL + ++Q+ +G + +++D +T S+G+ F + I +
Sbjct: 45 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 104
Query: 455 QAI 463
A+
Sbjct: 105 SAM 107
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
P K+FIGGL + ++Q+ +G + +++D +T S+G+ F + I +
Sbjct: 65 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 124
Query: 455 QAI 463
A+
Sbjct: 125 SAM 127
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
P K+FIGGL + ++Q+ +G + +++D +T S+G+ F + I +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 455 QAI 463
A+
Sbjct: 126 SAM 128
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.1 bits (77), Expect = 0.025
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++G +P E+++ + G + +V D TG +G+AF E+ + + +A+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 35.1 bits (77), Expect = 0.025
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
K+++GGLP+ +++E+ FG++R + + G+AF EY D+ + A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAV 56
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 35.1 bits (77), Expect = 0.025
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
K+++GGLP+ +++E+ FG++R + + G+AF EY D+ + A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAV 56
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 35.1 bits (77), Expect = 0.025
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
K+++GGLP+ +++E+ FG++R + + G+AF EY D+ + A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAV 56
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 2233 ATSRDDCTCPVWRAPPACQHSL 2254
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 2233 ATSRDDCTCPVWRAPPACQHSL 2254
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 536 ATSRDDCTCPVWRAPPACQHSL 557
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 2233 ATSRDDCTCPVWRAPPACQHSL 2254
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 2233 ATSRDDCTCPVWRAPPACQHSL 2254
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SSSINRCICPVWRKPPATQFSL 77
++S + C CPVWR PPA Q SL
Sbjct: 536 ATSRDDCTCPVWRAPPACQHSL 557
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.077
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVD 439
++ ++F G L N ++++ + + + + +V++S T SKGY F + D
Sbjct: 200 ENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRD 253
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+++G L Y EDQV EL G +R + D G+ F EY
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
>U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical
protein C08A9.3 protein.
Length = 739
Score = 31.5 bits (68), Expect = 0.31
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 343 FLNLIFIQIVWQTTNKYFVRRIWYYCTYDTSWNIYGR---IFSARHGLIVVRPTYLQALS 173
FL L+ + I+W TN R + Y +SW Y I+S RHG+ + ++ A+S
Sbjct: 451 FLGLVSMGILWTITNNCPHRTTIHLDMYTSSWIFYAAFMWIYSKRHGVRKWQQFFIIAVS 510
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
D +F+GGLP + +++ ++ FG + + D G KG A + S ++
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 458 AI 463
A+
Sbjct: 376 AL 377
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +2
Query: 287 HKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+K+F+GG+ + +N + + FG + VK K A Y
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSY 253
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
D +F+GGLP + +++ ++ FG + + D G KG A + S ++
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 458 AI 463
A+
Sbjct: 376 AL 377
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +2
Query: 287 HKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+K+F+GG+ + +N + + FG + VK K A Y
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSY 253
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
D +F+GGLP + +++ ++ FG + + D G KG A + S ++
Sbjct: 102 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 161
Query: 458 AI 463
A+
Sbjct: 162 AL 163
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.31
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 DSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQ 457
D +F+GGLP + +++ ++ FG + + D G KG A + S ++
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 458 AI 463
A+
Sbjct: 376 AL 377
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +2
Query: 287 HKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+K+F+GG+ + +N + + FG + VK K A Y
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSY 253
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.41
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+ +L+++++ + FG++ + ++ D+ G KG+ F + D QA+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAV 295
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAF 424
+++ + LN+D +++ SFG + + ++ D + G SKG+ F
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGF 387
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
++IG L ++E + E G + + + +D+++ LS GYA+ + + ++A+
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 31.1 bits (67), Expect = 0.41
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+F+ +L+++++ + FG++ + ++ D+ G KG+ F + D QA+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAV 295
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAF 424
+++ + LN+D +++ SFG + + ++ D + G SKG+ F
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGF 387
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
++IG L ++E + E G + + + +D+++ LS GYA+ + + ++A+
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 308 LPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAF 424
L +Y E ++++ FG++ +LV D +G S+G+ F
Sbjct: 83 LSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGF 121
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++G L +NE + E + G + + + +D++T LS GYA+ + + ++A+
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 30.7 bits (66), Expect = 0.54
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+FIG + ++++E GQ+ + KD T K +A+ E+ D S + A+
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++G L +NE + E + G + + + +D++T LS GYA+ + + ++A+
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++G L +NE + E + G + + + +D++T LS GYA+ + + ++A+
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.72
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 95 KNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPMPG 223
KNFAF+EF+ ++ A+ G F+ + + + +P G
Sbjct: 87 KNFAFVEFQKLESVQLALVLSGTMFRNRKIMVTLKRTNKPGMG 129
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.9 bits (64), Expect = 0.95
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 242 NVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVK 388
N+P + T VP S H IFI GL ++ +++KE + +F+ VK
Sbjct: 36 NLPR-INETQVPQSKHTIFIRGLHGDISTEEIKEYIGEKVGKISFDFVK 83
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.9 bits (64), Expect = 0.95
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 242 NVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVK 388
N+P + T VP S H IFI GL ++ +++KE + +F+ VK
Sbjct: 36 NLPR-INETQVPQSKHTIFIRGLHGDISTEEIKEYIGEKVGKISFDFVK 83
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.95
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 NYLNEDQVKELLMS-FGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
N + D+ E++ S FG++ +V+D +G S YAF E+ + +QA
Sbjct: 249 NPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.9 bits (64), Expect = 0.95
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+F+ L E+ +KE L FG++ + K +G SKG AF +
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHF 311
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.95
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 NYLNEDQVKELLMS-FGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
N + D+ E++ S FG++ +V+D +G S YAF E+ + +QA
Sbjct: 249 NPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.9 bits (64), Expect = 0.95
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 NYLNEDQVKELLMS-FGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
N + D+ E++ S FG++ +V+D +G S YAF E+ + +QA
Sbjct: 180 NPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.9 bits (64), Expect = 0.95
Identities = 10/36 (27%), Positives = 25/36 (69%)
Frame = +2
Query: 284 PHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD 391
P K+F+G LP+ ++ +++K++ F ++ ++VK+
Sbjct: 2 PSKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN 37
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 0.95
Identities = 10/36 (27%), Positives = 25/36 (69%)
Frame = +2
Query: 284 PHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKD 391
P K+F+G LP+ ++ +++K++ F ++ ++VK+
Sbjct: 2 PSKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN 37
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 29.9 bits (64), Expect = 0.95
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEY 433
+++GG + E + + FG + A ++ D +G +G+ F E+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 245 VPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELL-MSFGQLRAFNLVKDSSTGLSKGYA 421
+PA S V + +++G LP ++ ++V EL M FG++ + + L YA
Sbjct: 149 LPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV-MYARMASGPDALPCAYA 207
Query: 422 FAEY 433
+ E+
Sbjct: 208 YVEF 211
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 245 VPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELL-MSFGQLRAFNLVKDSSTGLSKGYA 421
+PA S V + +++G LP ++ ++V EL M FG++ + + L YA
Sbjct: 149 LPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEV-MYARMASGPDALPCAYA 207
Query: 422 FAEY 433
+ E+
Sbjct: 208 YVEF 211
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQL 367
++F+G LPN + E ++KEL G +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQL 367
++F+G LPN + E ++KEL G +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQL 367
++F+G LPN + E ++KEL G +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQL 367
K+FIGGLP ++E+QV +FG++
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +2
Query: 275 PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTD 454
PD + +FI LP + + FG + + + D T LSK + F Y +
Sbjct: 332 PDGAN-LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSAT 390
Query: 455 QAIA 466
AI+
Sbjct: 391 NAIS 394
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLR 370
K+F+GGLP+ + E + +G+L+
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRLQ 115
>EF445111-1|ABQ01578.1| 251|Caenorhabditis elegans scramblase 3
protein.
Length = 251
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 346 KFLNLIFIQIVWQTTNKYFVRRIWY 272
+FL I I+ W+T NKY +++I Y
Sbjct: 64 QFLEPIEIRTGWETKNKYAIKKICY 88
>AF078785-2|AAC27093.1| 266|Caenorhabditis elegans Hypothetical
protein C04E12.7 protein.
Length = 266
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 346 KFLNLIFIQIVWQTTNKYFVRRIWY 272
+FL I I+ W+T NKY +++I Y
Sbjct: 64 QFLEPIEIRTGWETKNKYAIKKICY 88
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +2
Query: 293 IFIGGLPNYLNEDQVKELLMSFGQLRA------FNLVKDSSTGLSKGYAFAEYVDISMTD 454
+F+ G+ NE + ++ + G + + D +TG KG +VD S
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDASAAQ 262
Query: 455 QAI 463
QAI
Sbjct: 263 QAI 265
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 333 KLRNFSCHLGNCERSIWLKI 392
K+ N CH NC R I KI
Sbjct: 468 KVHNIKCHFDNCNRKIHWKI 487
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 326 EDQVKELLMSFGQLRAFNLVKDSSTGLSKGYA 421
+ Q++ +G +++ N+ D TGL +G+A
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFA 69
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 164 NFKGQSLKIRRPHDYQPMPGTENPAINVPAGVISTV 271
NF+ + P Y P P NPA N+P V +
Sbjct: 471 NFQMAPQNVPGPSLYNPYPVQANPAPNIPFNVYQNI 506
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 290 KIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQAI 463
+++IG LPN ++ V+ +G+L S + G+ F ++ D D A+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKL--------SDVIMKNGFGFVDFQDQRDADDAV 52
>AL110500-17|CAE18040.1| 190|Caenorhabditis elegans Hypothetical
protein Y87G2A.17 protein.
Length = 190
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -1
Query: 262 YDTSWNIYGRIFSARHGLIVVRPTYLQALSLKVDAIKSHSLCS 134
YDT W R S R VR + A KV S SLCS
Sbjct: 16 YDTPWEFLARPNSVRFSTADVRLSTSAAGDAKVSPHGSPSLCS 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,959,082
Number of Sequences: 27780
Number of extensions: 218467
Number of successful extensions: 816
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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