Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_J12
         (469 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   0.94 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.7  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 340 LNLIFIQIVWQTTNKYFVRRIWYYCTYDTSWNIYGRI 230
           + +I I + +     Y+V  +WY+   ++++ I  RI
Sbjct: 261 MTVIIIAVFFICWTPYYVMSLWYWIDRNSAYKIDQRI 297


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 277 WYYCTYDTSWNIYGRIFSARHG 212
           +Y+ T  TS N++G      HG
Sbjct: 476 YYFFTQRTSTNLWGEWMGVLHG 497


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +2

Query: 308 LPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGYAFAEYVDISMTDQA 460
           +PN    +  K  +     +  +     +  G+S     +EYVDI++T  A
Sbjct: 366 IPNTEVFNDTKITITGLNAVTTYRFQVFAENGVSALAGKSEYVDITVTTDA 416


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 299 IGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGL 406
           + G P   N+   +   M+   + A   +KD STGL
Sbjct: 478 VSGAPVKENDHADRVCDMALDMVEAITDLKDRSTGL 513


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,662
Number of Sequences: 438
Number of extensions: 2698
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)