Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J11
(312 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 151 8e-38
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 151 8e-38
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 151 8e-38
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 151 8e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 151 8e-38
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 101 1e-22
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 4e-17
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 81 1e-16
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 81 1e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 72 7e-14
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 55 9e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 43 4e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 43 5e-05
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 7e-05
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 7e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 2e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 40 3e-04
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 38 0.001
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 38 0.001
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 37 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.006
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 34 0.018
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.032
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.055
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.097
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 28 1.6
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 28 1.6
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 28 1.6
Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical pr... 27 2.1
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 2.1
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 27 2.1
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 27 2.8
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 2.8
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 2.8
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 2.8
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 27 2.8
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 26 6.4
Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical pr... 25 8.4
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 25 8.4
AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein. 25 8.4
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 25 8.4
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 25 8.4
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 25 8.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 149 bits (361), Expect = 4e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTL GKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 93.1 bits (221), Expect = 4e-20
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAG 178
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
Score = 149 bits (361), Expect = 4e-37
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTL GKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 150 bits (364), Expect = 2e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 218 IQKESTLHLVLRLRGG 265
IQK+STLHLVLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 151 bits (367), Expect = 8e-38
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRLRGG 265
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 101 bits (242), Expect = 1e-22
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M I VKTLTGK I L++EP+D +E + K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 218 IQKESTLHLVLRLRGG 265
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.0 bits (196), Expect = 4e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+ + VKTL GKTI + ++ +DT+E + K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 218 IQKESTLHLVLRLR 259
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 59 LTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 238
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 239 HL 244
L
Sbjct: 152 RL 153
Score = 34.3 bits (75), Expect = 0.018
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 14 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGI 145
++ V TM + VKT TGKTIT+E +NV +++DK+G+
Sbjct: 51 QISVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 81.4 bits (192), Expect = 1e-16
Identities = 43/88 (48%), Positives = 62/88 (70%)
Frame = +2
Query: 44 IFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 223
+FVKTL +T+ LEV ++ + ++ KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 224 KESTLHLVLRLRGGAKKREKKSCSTPKK 307
E+T+++ L L GGAKKR+KK +TPKK
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKK 84
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 81.4 bits (192), Expect = 1e-16
Identities = 43/88 (48%), Positives = 62/88 (70%)
Frame = +2
Query: 44 IFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 223
+FVKTL +T+ LEV ++ + ++ KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 224 KESTLHLVLRLRGGAKKREKKSCSTPKK 307
E+T+++ L L GGAKKR+KK +TPKK
Sbjct: 57 SEATIYVNLELLGGAKKRKKKVYTTPKK 84
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 72.1 bits (169), Expect = 7e-14
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIP 148
MQIFVKTLTGKTITLEVE SDTIENV AKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 55.2 bits (127), Expect = 9e-09
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +2
Query: 41 QIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 220
QIFVK L G + ++ DT+ ++ I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 221 QKESTLHLVLR 253
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 208
++I+V+ G+T TL+ SDT+ +V AKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 209 DYNIQKESTLHL 244
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGI 145
M + +KT TGK IT+E S V +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEV 88
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 42.7 bits (96), Expect = 5e-05
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +2
Query: 41 QIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 220
Q FV+ L GKT TL V SDT+E K+Q R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVE--QGKMQLCHN--ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 221 QKESTLHLVLRL 256
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 42.3 bits (95), Expect = 7e-05
Identities = 18/72 (25%), Positives = 41/72 (56%)
Frame = +2
Query: 59 LTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 238
+ G + ++ + + + +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 239 HLVLRLRGGAKK 274
+L ++ RGG KK
Sbjct: 644 YLQVKERGGKKK 655
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 42.3 bits (95), Expect = 7e-05
Identities = 18/72 (25%), Positives = 41/72 (56%)
Frame = +2
Query: 59 LTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 238
+ G + ++ + + + +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 239 HLVLRLRGGAKK 274
+L ++ RGG KK
Sbjct: 644 YLQVKERGGKKK 655
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 44 IFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGK 181
+FVKTL +T+ LEV ++ + ++ KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +2
Query: 62 TGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 241
+G L V SDTI V I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 242 L 244
L
Sbjct: 241 L 241
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 32 STMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 211
+T+++ +KTL + T+ + DTI++++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 212 YNIQKESTLHLVLRLRGGAKKR 277
I T+HLV R G R
Sbjct: 79 AGISDGQTVHLVDRGPSGENDR 100
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 32 STMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 211
+T+++ +KTL + T+ + DTI++++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 212 YNIQKESTLHLVLRLRGGAKKR 277
I T+HLV R G R
Sbjct: 79 AGISDGQTVHLVDRGPSGENDR 100
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 80 LEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 259
L V SDTI ++ +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 80 LEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 238
L V SDTI + +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 95 SDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKK 274
S ++ +++ +D ++QRL +A + D I+ +T+++ L GGAKK
Sbjct: 34 SSIVQKLISPFKDGSTCKEEEQRLCYAAGK-------GDCGIKAAATIYVNCELLGGAKK 86
Query: 275 REKKSCSTPKK 307
R+KK PKK
Sbjct: 87 RKKKVYIIPKK 97
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 34.3 bits (75), Expect = 0.018
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 206 SDYNIQKESTLHLVLRLRGGAKKREKKSCSTPKK 307
SD I+ +T+++ L GGAKKR+KK + PKK
Sbjct: 52 SDCGIKAAATIYVNCELLGGAKKRKKKVYTIPKK 85
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.032
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +2
Query: 53 KTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 232
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 233 TLHLV 247
+ L+
Sbjct: 73 QIMLL 77
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 32.7 bits (71), Expect = 0.055
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = +2
Query: 56 TLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 235
++ G+ ++ +++E + KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 236 LHLVLR 253
+ L++R
Sbjct: 207 VELLVR 212
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.9 bits (69), Expect = 0.097
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 59 LTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 238
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 50 VKTLTGKTITLEVEPSDTIENVMAKIQDKEGIP 148
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 14 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFA 175
R+ V+ M +TLTG I + EP + A +Q E P + QR++ A
Sbjct: 531 RLNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 14 RVGVR*STMQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFA 175
R+ V+ M +TLTG I + EP + A +Q E P + QR++ A
Sbjct: 531 RLNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>Z82077-3|CAB63331.1| 122|Caenorhabditis elegans Hypothetical
protein W09C5.6a protein.
Length = 122
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 173 AGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GAKKREKKSCSTPKK 307
A K + R+ + + +E T+H+ R+RG G+KKR ++ KK
Sbjct: 2 APKNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKK 47
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 164 LIFAGKQLEDGRTLSDYNIQKESTLHL 244
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQLED 193
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 220 DIVIREGSTIFQLFTGEDQSLLIRRDALLILNLGH 116
+I +REG TIF G D+ +RR+A + L +GH
Sbjct: 672 EIAVREGRTIFDQHQGTDKQ-EVRRNAAIDL-VGH 704
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 137 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRE 280
EG P PD + + G QL DG L +I+K + RGG K+ +
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETD 1511
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 137 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRE 280
EG P PD + + G QL DG L +I+K + RGG K+ +
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETD 1574
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 137 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRE 280
EG P PD + + G QL DG L +I+K + RGG K+ +
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETD 1574
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 27.1 bits (57), Expect = 2.8
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 38 MQIFVKTLTGKTITLEVEPSDTIENVMAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 214
M + +KT TGKTIT+E S V +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 215 NIQK 226
IQ+
Sbjct: 56 KIQE 59
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 68 KTITLEVEPSDTIENVMAKIQDKEGIPPDQQRL 166
KT+ +V+ T+E + +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical protein
F13E6.6 protein.
Length = 1340
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 113 VMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKK 274
V K+Q K+ IP + QRL+ LE T++ Y + + +LR AK+
Sbjct: 884 VCRKLQLKDMIPVEMQRLVKYPLLLE---TIAKYTTEPSEEQNCLLRTVASAKR 934
>Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical protein
F13E6.6 protein.
Length = 1340
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 113 VMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKK 274
V K+Q K+ IP + QRL+ LE T++ Y + + +LR AK+
Sbjct: 884 VCRKLQLKDMIPVEMQRLVKYPLLLE---TIAKYTTEPSEEQNCLLRTVASAKR 934
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 187 GRWSNPL*LQYPEGVDAPLSAPPARW 264
GRW+ + P G P+ PP RW
Sbjct: 824 GRWTTLMTEWRPYGWKRPVGRPPMRW 849
>AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein.
Length = 1293
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 113 VMAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKK 274
V K+Q K+ IP + QRL+ LE T++ Y + + +LR AK+
Sbjct: 837 VCRKLQLKDMIPVEMQRLVKYPLLLE---TIAKYTTEPSEEQNCLLRTVASAKR 887
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 187 GRWSNPL*LQYPEGVDAPLSAPPARW 264
GRW+ + P G P+ PP RW
Sbjct: 999 GRWTTLMTEWRPYGWKRPVGRPPMRW 1024
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 187 GRWSNPL*LQYPEGVDAPLSAPPARW 264
GRW+ + P G P+ PP RW
Sbjct: 738 GRWTTLMTEWRPYGWKRPVGRPPMRW 763
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 187 GRWSNPL*LQYPEGVDAPLSAPPARW 264
GRW+ + P G P+ PP RW
Sbjct: 350 GRWTTLMTEWRPYGWKRPVGRPPMRW 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,011,495
Number of Sequences: 27780
Number of extensions: 140106
Number of successful extensions: 473
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -