Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_J09
         (268 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018710-1|AAH18710.1|  521|Homo sapiens family with sequence si...    58   7e-09
AK056319-1|BAB71148.1|  521|Homo sapiens protein ( Homo sapiens ...    58   7e-09
AC005682-1|AAS01991.1|  312|Homo sapiens unknown protein.              58   7e-09
AB030241-1|BAB39849.1|  521|Homo sapiens DRCTNNB1A protein.            58   7e-09
BC039295-1|AAH39295.1|  530|Homo sapiens family with sequence si...    48   7e-06
AC005037-1|AAY14726.1|  419|Homo sapiens unknown protein.              48   7e-06
BC013947-1|AAH13947.2|  640|Homo sapiens KIAA0841 protein protein.     27   8.1  
AB020648-1|BAA74864.1|  641|Homo sapiens KIAA0841 protein protein.     27   8.1  

>BC018710-1|AAH18710.1|  521|Homo sapiens family with sequence
           similarity 126, member A protein.
          Length = 521

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RIPVSS  +++M+ G YFA +N  + LA +A+ DI  RAQ ELY + +LV +A+  SL +
Sbjct: 229 RIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPH 288

Query: 232 NSSGQPNDG 258
                  +G
Sbjct: 289 GPMKSNKEG 297


>AK056319-1|BAB71148.1|  521|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31757 fis, clone NT2RI2007572. ).
          Length = 521

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RIPVSS  +++M+ G YFA +N  + LA +A+ DI  RAQ ELY + +LV +A+  SL +
Sbjct: 229 RIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPH 288

Query: 232 NSSGQPNDG 258
                  +G
Sbjct: 289 GPMKSNKEG 297


>AC005682-1|AAS01991.1|  312|Homo sapiens unknown protein.
          Length = 312

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RIPVSS  +++M+ G YFA +N  + LA +A+ DI  RAQ ELY + +LV +A+  SL +
Sbjct: 20  RIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPH 79

Query: 232 NSSGQPNDG 258
                  +G
Sbjct: 80  GPMKSNKEG 88


>AB030241-1|BAB39849.1|  521|Homo sapiens DRCTNNB1A protein.
          Length = 521

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RIPVSS  +++M+ G YFA +N  + LA +A+ DI  RAQ ELY + +LV +A+  SL +
Sbjct: 229 RIPVSSGFMVQMLTGIYFAFYNGEWDLAQKALDDIIYRAQLELYPEPLLVANAIKASLPH 288

Query: 232 NSSGQPNDG 258
                  +G
Sbjct: 289 GPMKSNKEG 297


>BC039295-1|AAH39295.1|  530|Homo sapiens family with sequence
           similarity 126, member B protein.
          Length = 530

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/69 (31%), Positives = 41/69 (59%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RI +    +++++ G Y+AM+N  + L  + + DI  RAQ EL++  +LV +A+ NSL  
Sbjct: 229 RIVLDPEFMVQLLTGVYYAMYNGQWDLGQEVLDDIIYRAQLELFSQPLLVANAMKNSLPF 288

Query: 232 NSSGQPNDG 258
           ++     +G
Sbjct: 289 DAPDSTQEG 297


>AC005037-1|AAY14726.1|  419|Homo sapiens unknown protein.
          Length = 419

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/69 (31%), Positives = 41/69 (59%)
 Frame = +1

Query: 52  RIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLEN 231
           RI +    +++++ G Y+AM+N  + L  + + DI  RAQ EL++  +LV +A+ NSL  
Sbjct: 118 RIVLDPEFMVQLLTGVYYAMYNGQWDLGQEVLDDIIYRAQLELFSQPLLVANAMKNSLPF 177

Query: 232 NSSGQPNDG 258
           ++     +G
Sbjct: 178 DAPDSTQEG 186


>BC013947-1|AAH13947.2|  640|Homo sapiens KIAA0841 protein protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 51  GNSFIAIRHLIGLPP 7
           G+SFIA+ H +GLPP
Sbjct: 497 GSSFIALSHKLGLPP 511


>AB020648-1|BAA74864.1|  641|Homo sapiens KIAA0841 protein protein.
          Length = 641

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 51  GNSFIAIRHLIGLPP 7
           G+SFIA+ H +GLPP
Sbjct: 498 GSSFIALSHKLGLPP 512


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,470,004
Number of Sequences: 237096
Number of extensions: 709365
Number of successful extensions: 781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)