Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J09
(268 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical ... 52 6e-08
AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical ... 52 6e-08
Z81147-9|CAB03538.1| 349|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 25 5.6
Z83221-8|CAI79139.1| 469|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z83221-7|CAB05707.2| 503|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 25 7.4
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 25 7.4
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 25 7.4
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical
protein D1069.3a protein.
Length = 451
Score = 52.0 bits (119), Expect = 6e-08
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 49 PRIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLE 228
PR VS L ++ G Y A+FN LA QAI I RAQYE+ D +LV +++ NSL
Sbjct: 255 PRQQVSGEFLNHLLRGCYLALFNGAADLALQAIDAIHLRAQYEMLPDTLLVVNSLRNSLL 314
Query: 229 NNSSGQPNDGPM 264
+N + G +
Sbjct: 315 DNMWSKEKRGEL 326
>AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical
protein D1069.3b protein.
Length = 509
Score = 52.0 bits (119), Expect = 6e-08
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 49 PRIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSLE 228
PR VS L ++ G Y A+FN LA QAI I RAQYE+ D +LV +++ NSL
Sbjct: 255 PRQQVSGEFLNHLLRGCYLALFNGAADLALQAIDAIHLRAQYEMLPDTLLVVNSLRNSLL 314
Query: 229 NNSSGQPNDGPM 264
+N + G +
Sbjct: 315 DNMWSKEKRGEL 326
>Z81147-9|CAB03538.1| 349|Caenorhabditis elegans Hypothetical
protein T09E11.11 protein.
Length = 349
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 106 AMFNEFYTLAHQAIIDIDERAQYELYADVMLVTSAVMNSL 225
A+FN F +L II +R Q +Y + + + SL
Sbjct: 69 ALFNNFSSLQAHMIIRFSQRKQILVYVTISFIVLVLFYSL 108
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 7 GRKADQVSNSNKTVPRIPVSSTLLLEMIEGSYFAMFNEFYTLAHQAIIDI 156
G+K DQ NK VPR V + ++E + F+ N +Y + I ++
Sbjct: 104 GKKKDQYYIDNKMVPRAEV-----VNLMESAGFSRSNPYYIVKQGKINEL 148
>Z83221-8|CAI79139.1| 469|Caenorhabditis elegans Hypothetical
protein C49A1.4b protein.
Length = 469
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 1 ARGRKADQVSNSNKTVPRIPVSSTLLLEMIEGSYFAMF---NEFYTLAHQAIIDIDERAQ 171
++ +K S ++T R+ + + +I +Y A NEFY A ++ + ER
Sbjct: 181 SKKKKTGSCSPGDETYARVFIWDIDDIAVISRNYLASVTHTNEFYARAANSVSHLMERIA 240
Query: 172 YELYADV 192
+ADV
Sbjct: 241 LNNFADV 247
>Z83221-7|CAB05707.2| 503|Caenorhabditis elegans Hypothetical
protein C49A1.4a protein.
Length = 503
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 1 ARGRKADQVSNSNKTVPRIPVSSTLLLEMIEGSYFAMF---NEFYTLAHQAIIDIDERAQ 171
++ +K S ++T R+ + + +I +Y A NEFY A ++ + ER
Sbjct: 215 SKKKKTGSCSPGDETYARVFIWDIDDIAVISRNYLASVTHTNEFYARAANSVSHLMERIA 274
Query: 172 YELYADV 192
+ADV
Sbjct: 275 LNNFADV 281
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +3
Query: 126 HACPSSYY*HRR---ESTV*TLRRRNA 197
H CP+S+Y HR STV RR N+
Sbjct: 1192 HVCPTSHYCHRGADVRSTVCCARRGNS 1218
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +3
Query: 126 HACPSSYY*HRR---ESTV*TLRRRNA 197
H CP+S+Y HR STV RR N+
Sbjct: 1610 HVCPTSHYCHRGADVRSTVCCARRGNS 1636
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 228 FQ*IHHGTSDEHYVGVKFI-LCSLVYVNNSLMGKRVELIEHRKV 100
F + +D H++ + LC+L+ +N L ++L H KV
Sbjct: 614 FSNVEFDKTDMHFIWKSAVFLCALLAINFPLTKSSIDLHSHEKV 657
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 51 PDTGIIDFIVRND*GFILC 107
PDTG+++ + ND F +C
Sbjct: 256 PDTGVVECLQENDDKFSMC 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,239,642
Number of Sequences: 27780
Number of extensions: 105789
Number of successful extensions: 156
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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