Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J08
(301 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 30 0.005
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 0.35
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.35
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.35
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 0.46
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 0.61
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 2.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 4.3
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 4.3
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 4.3
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 4.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 20 5.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 20 7.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 7.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 7.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 7.6
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.005
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 NGHSKMSNGHCDNKINGHAEKMDGFGGDKINGYDKSDIKKLNGHNNMNGRE-TKPNVTMN 217
N + + N DNK NG+ + + G++ NG ++D K+ N N R + N N
Sbjct: 466 NDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQN 525
Query: 218 THESDIEN 241
+ N
Sbjct: 526 NQNDNNRN 533
Score = 29.5 bits (63), Expect = 0.009
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +2
Query: 41 NGHSKMSNGHCDNKINGHAEKMDGFGGDKINGYDKSDIKKLNGH----NNMNGRETKPNV 208
NG+ + N DNK NG+ + + G++ N +K + + NG+ N NG N
Sbjct: 456 NGNRQNDNRQNDNKQNGNRQNDNKQNGNRQND-NKQNGNRQNGNKQNDNKQNGNRQNDNK 514
Query: 209 TMNTHESDIEN 241
++D +N
Sbjct: 515 RNGNRQNDNQN 525
Score = 27.9 bits (59), Expect = 0.029
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 29 GSDCNGHSKMSNGHCDNKINGHAEKMDGFGGDKINGYDKSDIKKLNGHNNMNGRETKPN 205
G+ N + + N DNK NG+ + + +K NG ++D K+ NG N N + N
Sbjct: 472 GNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKR-NG-NRQNDNQNNQN 528
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.2 bits (50), Expect = 0.35
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 300 ILRATFGFFGDPRSIRWVL*FSISDSWVFIV 208
IL FF D S RW+ +SD+ +F++
Sbjct: 105 ILPVAISFFNDDLSTRWIAFNCLSDT-IFLI 134
Score = 20.2 bits (40), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 222 WVFIVTFGLVSRPFILLCPFSFFISDLSYPFI 127
W + LV+ IL SFF DLS +I
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.2 bits (50), Expect = 0.35
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 300 ILRATFGFFGDPRSIRWVL*FSISDSWVFIV 208
IL FF D S RW+ +SD+ +F++
Sbjct: 105 ILPVAISFFNDDLSTRWIAFNCLSDT-IFLI 134
Score = 20.2 bits (40), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 222 WVFIVTFGLVSRPFILLCPFSFFISDLSYPFI 127
W + LV+ IL SFF DLS +I
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.2 bits (50), Expect = 0.35
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 300 ILRATFGFFGDPRSIRWVL*FSISDSWVFIV 208
IL FF D S RW+ +SD+ +F++
Sbjct: 105 ILPVAISFFNDDLSTRWIAFNCLSDT-IFLI 134
Score = 20.2 bits (40), Expect = 5.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 222 WVFIVTFGLVSRPFILLCPFSFFISDLSYPFI 127
W + LV+ IL SFF DLS +I
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFNDDLSTRWI 122
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.8 bits (49), Expect = 0.46
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 207 TFGLVSRPFILLCPFSFFISDLSYPFILSP 118
T G++ FI+ C FF+ L PF+ +P
Sbjct: 373 TLGIIMSAFIV-CWLPFFVLALVRPFLKNP 401
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 0.61
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 216 FIVTFGLVSRPFILLCPFSFFISDLSYPFI 127
++VTF LV RP ++C F + + +
Sbjct: 706 YLVTFALVLRPTDIVCGIQRFAAGFCFTVV 735
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 2.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 130 YLVTTKSIHFLSVTIYFIITVTVAHFTVSVT 38
Y VT ++ F + T ++ V +FT VT
Sbjct: 142 YAVTKSAMFFFAATSLLVVA-EVCYFTAHVT 171
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 20.6 bits (41), Expect = 4.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 116 QIHPFSQRDHLFYYHSDRCSFYCVRYSRIR 27
Q + S RD FY + Y +RY +++
Sbjct: 409 QSYSTSMRDPAFYMLYQKILSYFLRYKKLQ 438
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 206 VTMNTHESDIENYKTHRMDL 265
V + +SD+E+YK + DL
Sbjct: 167 VQLLVSDSDVESYKQIKSDL 186
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 219 VFIVTFGLVSRPF 181
VF +TFGLV+ F
Sbjct: 245 VFCITFGLVAGQF 257
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 20.6 bits (41), Expect = 4.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 206 VTMNTHESDIENYKTHRMDL 265
V + +SD+E+YK + DL
Sbjct: 135 VQLLVSDSDVESYKQIKSDL 154
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.2 bits (40), Expect = 5.7
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = +2
Query: 41 NGHSKMSNGHC---DNKINGHAEKMDGFGGDKINGYDKSDIKKLNGHNNMNGRETKPNVT 211
N + + N C DN+ N H ++ KSD + N HN+ +K N
Sbjct: 404 NVNDLIRNSRCANFDNQDNNHYNH----NHNQARHSSKSDNQNNNQHNDQAHHSSKSNNR 459
Query: 212 MNTHE 226
N ++
Sbjct: 460 HNNND 464
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 19.8 bits (39), Expect = 7.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 116 QIHPFSQRDHLFYYHSDRCSFYCVRYSRIR 27
Q + S RD FY Y +RY +++
Sbjct: 409 QSYSTSMRDPAFYMLYQNILSYFLRYKKLQ 438
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 131 NGYDKSDIKKLNGHNNMN 184
N Y+ S+ N +NN N
Sbjct: 87 NNYNYSNYNNYNNNNNYN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,027
Number of Sequences: 438
Number of extensions: 2116
Number of successful extensions: 32
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6244050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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