Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J07
(315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031630-7|CAA20982.1| 158|Caenorhabditis elegans Hypothetical ... 43 5e-05
AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical ... 40 3e-04
AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical ... 39 9e-04
AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical ... 35 0.011
U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin p... 33 0.033
Z78019-8|CAJ85784.2| 195|Caenorhabditis elegans Hypothetical pr... 33 0.043
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 31 0.13
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 30 0.40
U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin p... 30 0.40
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 0.53
Z81044-1|CAB02810.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.93
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 29 0.93
U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin ... 28 1.2
Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical pr... 28 1.6
U28739-2|AAB93455.1| 286|Caenorhabditis elegans Lysozyme protei... 27 2.8
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 27 2.8
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 27 2.8
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 26 5.0
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 26 5.0
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 26 5.0
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 26 5.0
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 26 5.0
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 26 5.0
AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 26 5.0
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 26 5.0
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 26 6.6
Z81593-7|CAB63316.2| 400|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 26 6.6
U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical pr... 26 6.6
U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical pr... 26 6.6
U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical pr... 26 6.6
U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical pr... 26 6.6
U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 26 6.6
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 26 6.6
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 26 6.6
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z22179-10|CAD91636.1| 136|Caenorhabditis elegans Hypothetical p... 25 8.7
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 25 8.7
>AL031630-7|CAA20982.1| 158|Caenorhabditis elegans Hypothetical
protein Y38H6C.8 protein.
Length = 158
Score = 42.7 bits (96), Expect = 5e-05
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 86 WMGAVRDPQDPTNWKWVNGNDISVSFW--NAPGGGENCARFDGIFG*LWADTDCQARMNY 259
W+GA D TNW W++G+ + S W P +C G W C R+ +
Sbjct: 82 WIGA-SDAAHYTNWTWIDGSPMRFSNWGPGQPLEDRHCGTMLISTG-KWFSQVCDERIQF 139
Query: 260 MCQHQPNACGTPEQPP 307
+CQ+ PN +P PP
Sbjct: 140 LCQY-PNGAYSPTCPP 154
>AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical
protein Y46H3B.2 protein.
Length = 551
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 86 WMGAVRDPQDPTNWKWVNGN--DISVSFWNA--PGGGENCARFDGIFG-*LWADTDCQAR 250
W G RDP + +NW ++NG+ D S W + P + C + W +TDC +
Sbjct: 476 WFGLKRDPSNSSNWYFINGDTYDSSYQNWRSGYPRDADGCDCVALVINDNSWVNTDCNKQ 535
Query: 251 MNYMCQHQPNACGT 292
+ +C Q N T
Sbjct: 536 LYSICAFQFNFTDT 549
>AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical
protein Y46H3B.1 protein.
Length = 557
Score = 38.7 bits (86), Expect = 9e-04
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 71 SSSQDWMGAVRDPQDPTNWKWVNGN--DISVSFWNA--PGGGENCARFDGIFG-*LWADT 235
S W G RDP + +NW ++NG+ D S W + P + C + W +T
Sbjct: 483 SDGMFWFGLKRDPTNSSNWYFINGDTYDSSYQNWRSGYPRDADGCDCVALVINDNSWVNT 542
Query: 236 DCQARMNYMCQHQPN 280
DC ++ +C + N
Sbjct: 543 DCNKQLYSICAFRYN 557
>AF040654-7|AAK21450.2| 362|Caenorhabditis elegans Hypothetical
protein R06B10.3 protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +2
Query: 86 WMGAVRDPQDPTNWKWVNGNDISVSFWNAPGGGENCARFDGIFG*LWADTDCQARMNYMC 265
W+G + D +W+W++G D+ W + C W DC + C
Sbjct: 90 WIG-LTDMTADGSWEWIDGLDLVFMNWASSSTAGYCGAMRAADA-RWQAQDCTKPYPFFC 147
Query: 266 QHQPNACGTPEQPPNS 313
+ P A G P PPN+
Sbjct: 148 -YGP-ALGAPTNPPNT 161
>U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin
protein 51 protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +2
Query: 86 WMGA---VRDPQDPTNWKWVNGNDISVSFWN----APGGGENCARFDGIFG*LWADTDCQ 244
W+GA D +P NW W +G++ + +P G C + W T+C
Sbjct: 82 WLGAKTTAPDVTNPLNWYWTDGSNFDYQNYKVGQPSPQGDTACMQLQTGTA-KWQTTNCT 140
Query: 245 ARMNYMCQHQPNACGT 292
A++ ++C + + T
Sbjct: 141 AQLPFICSYSSSVTPT 156
>Z78019-8|CAJ85784.2| 195|Caenorhabditis elegans Hypothetical
protein ZK863.9 protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.043
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +2
Query: 65 SDSSSQDWMGAVRDPQDPTNWKWVNGNDISVSFWNAPGG----GENCARFDGIFG*LWAD 232
+ SS + W+G + WKWVN +D V F N P G G +C + I G +W
Sbjct: 122 TSSSQETWIGLSKTNNGA--WKWVNSSD--VDFTNLPDGTTVNGASCVSMN-ISG-IWQP 175
Query: 233 TDC-QARMNYMCQ 268
+C +++C+
Sbjct: 176 KECTSTASSFICK 188
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 136 HPLPVGRILWIPD--GTHPILTAT 71
HP P +I+WIPD GT P L AT
Sbjct: 201 HPYPATKIMWIPDQKGTFPDLLAT 224
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 29.9 bits (64), Expect = 0.40
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 225 QS*PKIPSKRAQFSPPPGAFQKDTLMS-LPFTHFQLVGSCGS 103
QS IP K Q+ G + D L LP+TH+ ++ SCGS
Sbjct: 293 QSQKAIPFKWRQYFDATG--EDDVLTQILPYTHYDILNSCGS 332
>U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin
protein 52 protein.
Length = 308
Score = 29.9 bits (64), Expect = 0.40
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Frame = +2
Query: 86 WMGA---VRDPQDPTNWKWVNGNDISVSFWN----APGGGENCARFDGIFG*LWADTDCQ 244
W+GA D +P NW W +G D + + G C + + W +C
Sbjct: 82 WLGAQASAPDVTNPLNWYWTDGTDFNYQNYKVGQPTQTGSTACMQLETGTS-KWQTANCT 140
Query: 245 ARMNYMCQHQPNACGT 292
++ ++C +A T
Sbjct: 141 TKLPFICSASASAMPT 156
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 175 WSVPERHTDVIAVHPLPVGRILWIPDGTHPILTATVASVS 56
W+ PE + + P+GR+ W PD P AT ASV+
Sbjct: 266 WTGPELNRISVVETTAPLGRVAWRPD--RPYHLATCASVN 303
>Z81044-1|CAB02810.1| 223|Caenorhabditis elegans Hypothetical
protein C30H6.1 protein.
Length = 223
Score = 28.7 bits (61), Expect = 0.93
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 71 SSSQDWMGAVRDPQDPTNWKWVNGNDISVSFW 166
S DW+G R+ D T W W +G + +W
Sbjct: 160 SKMDDWIGLRRNC-DNTAWAWTDGTPVDFLWW 190
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 28.7 bits (61), Expect = 0.93
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 139 VHPLPVGRILWIPDGTHPILTATVASVSS 53
++P+ + +++W+PD PIL TV + S
Sbjct: 104 IYPMALVQLIWVPDTELPILAPTVFEMLS 132
>U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin
protein 53 protein.
Length = 308
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Frame = +2
Query: 86 WMGA---VRDPQDPTNWKWVNGNDISVSFWN----APGGGENCARFDGIFG*LWADTDCQ 244
W+GA D +P NW W +G++ + P G C + + W +C
Sbjct: 82 WIGAQASAPDVTNPLNWYWTDGSNFDYQNYKVGQPTPPGSTACMQLETGTA-KWQTANCT 140
Query: 245 ARMNYMC 265
++ ++C
Sbjct: 141 NKLPFIC 147
>Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical
protein C36A4.6 protein.
Length = 501
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 32 FISWELWRRHRSDSSSQDWMGAVRDPQDPTNWKWVNGNDI 151
FIS+ +WRRH + ++ P P +W W N N I
Sbjct: 16 FISYSIWRRH----AIFKLRSSIGIPGPPVHWLWGNLNII 51
>U28739-2|AAB93455.1| 286|Caenorhabditis elegans Lysozyme protein 8
protein.
Length = 286
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 110 QDPTNWKWVNGNDISVSFWNAPGGGEN 190
Q W + GND+ + +WN GGG N
Sbjct: 193 QITNGWSSI-GNDVLLWYWNVLGGGVN 218
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D + L + H ++G GSLT
Sbjct: 585 GAFIRDITLGLEYLHSSIIGYHGSLT 610
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D + L + H ++G GSLT
Sbjct: 615 GAFIRDITLGLEYLHSSIIGYHGSLT 640
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = +2
Query: 107 PQDPTN-WKWVNGNDISVS-FWNA 172
P+ T+ WKW+NGN+I+ + W++
Sbjct: 117 PEGQTHEWKWLNGNEINKTLLWSS 140
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 86 WMGAVRDPQDPTNWKWVNGNDI--SVSFWNAPGGGENCARFDGIFG*L---WADTDCQAR 250
W+GA T W+WV+G + S + P + + + L W A
Sbjct: 411 WIGA---SSSMTEWRWVDGEGVGDSADWPGQPSPVPSASEAVLLARPLEWKWVPASQTAW 467
Query: 251 MNYMCQHQPNACGTP 295
+++CQ +P C +P
Sbjct: 468 NSFLCQSKPKFCTSP 482
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D L L + H +G GSLT
Sbjct: 718 GAFIRDILAGLEYLHASQIGYHGSLT 743
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 233 CQPR-ASQKFRRSERSSLHHLERSRKT 156
C PR S++ ++S +S HH RSR +
Sbjct: 620 CSPRDRSREHKKSRKSGRHHRSRSRSS 646
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 233 CQPR-ASQKFRRSERSSLHHLERSRKT 156
C PR S++ ++S +S HH RSR +
Sbjct: 706 CSPRDRSREHKKSRKSGRHHRSRSRSS 732
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 233 CQPR-ASQKFRRSERSSLHHLERSRKT 156
C PR S++ ++S +S HH RSR +
Sbjct: 708 CSPRDRSREHKKSRKSGRHHRSRSRSS 734
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 233 CQPR-ASQKFRRSERSSLHHLERSRKT 156
C PR S++ ++S +S HH RSR +
Sbjct: 706 CSPRDRSREHKKSRKSGRHHRSRSRSS 732
>AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical
protein Y25C1A.4 protein.
Length = 533
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 107 PQDPTNWKWVNGNDISVSFWNAPGGGENCARFDGIFG*L-WADTDCQA 247
P PT NG ++ F+N P GG F G F A+ CQA
Sbjct: 141 PAPPTQPPVNNGCELGWKFFNRPSGGWCIKVFPGYFALKEHAENACQA 188
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D L L + H +G GSLT
Sbjct: 664 GAFIRDILAGLEYLHASQIGYHGSLT 689
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 209 IFG*LWADTDCQARMNYMCQHQP 277
I G LW DTDC+ + C P
Sbjct: 345 ICGPLWTDTDCETPVASACTPSP 367
>Z81593-7|CAB63316.2| 400|Caenorhabditis elegans Hypothetical
protein T20B3.13 protein.
Length = 400
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 77 SQDWMGAVRDPQDPTNWKWVNGNDISVSFWNAPG 178
SQ W+G + + + T+ +W NG++++ + APG
Sbjct: 198 SQIWLGLICNGKSVTSCQWDNGSNVTY-YDFAPG 230
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 263 CQHQPNACGTPEQ 301
C QP+ACG PE+
Sbjct: 565 CNRQPSACGLPEE 577
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 263 CQHQPNACGTPEQ 301
C QP+ACG PE+
Sbjct: 565 CNRQPSACGLPEE 577
>U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical
protein M03A1.6a protein.
Length = 765
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RGASPPCKDSSAGNYGEDTEATVAVKIGWVPSG 104
R +PP +++A N + T AVK GW G
Sbjct: 629 RSMTPPPFETAAANAAAAAKETKAVKKGWFSFG 661
>U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical
protein M03A1.6b protein.
Length = 753
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RGASPPCKDSSAGNYGEDTEATVAVKIGWVPSG 104
R +PP +++A N + T AVK GW G
Sbjct: 617 RSMTPPPFETAAANAAAAAKETKAVKKGWFSFG 649
>U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6d protein.
Length = 762
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RGASPPCKDSSAGNYGEDTEATVAVKIGWVPSG 104
R +PP +++A N + T AVK GW G
Sbjct: 626 RSMTPPPFETAAANAAAAAKETKAVKKGWFSFG 658
>U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6c protein.
Length = 762
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RGASPPCKDSSAGNYGEDTEATVAVKIGWVPSG 104
R +PP +++A N + T AVK GW G
Sbjct: 626 RSMTPPPFETAAANAAAAAKETKAVKKGWFSFG 658
>U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical
protein T05A7.3 protein.
Length = 155
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 224 WADTDCQARMNYMCQHQPN-ACGTPEQPP 307
W+ +DC A ++C+ CG P P
Sbjct: 9 WSKSDCAATQYFLCKRPTGITCGPPTPAP 37
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 263 CQHQPNACGTPEQ 301
C QP+ACG PE+
Sbjct: 565 CNRQPSACGLPEE 577
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 263 CQHQPNACGTPEQ 301
C QP+ACG PE+
Sbjct: 565 CNRQPSACGLPEE 577
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 263 CQHQPNACGTPEQ 301
C QP+ACG PE+
Sbjct: 565 CNRQPSACGLPEE 577
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
protein ZK896.8 protein.
Length = 1112
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D + L + H +G GSLT
Sbjct: 654 GAFVRDITLGLEYLHASPIGYHGSLT 679
>Z22179-10|CAD91636.1| 136|Caenorhabditis elegans Hypothetical
protein F58A4.7d protein.
Length = 136
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 241 TVCVSPELAKNSVEASAVLSTTWSVPERHTDVIAVHPLPV 122
T+ +P LA S+ A LS T P+R D V LP+
Sbjct: 81 TIGHAPMLANRSLSQPAPLSPTSLDPDRSIDPECVGKLPI 120
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 174 GAFQKDTLMSLPFTHFQLVGSCGSLT 97
GAF +D + L + H +G GSLT
Sbjct: 655 GAFVRDITLGLEYLHASPIGYHGSLT 680
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,271,809
Number of Sequences: 27780
Number of extensions: 175138
Number of successful extensions: 544
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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