Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J05
(363 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 141 3e-34
AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 141 3e-34
AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 141 3e-34
BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 86 1e-17
AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p pro... 27 9.7
AY051605-1|AAK93029.1| 600|Drosophila melanogaster GH24627p pro... 27 9.7
AE014297-3469|AAS65203.1| 356|Drosophila melanogaster CG33338-P... 27 9.7
AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB... 27 9.7
AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA... 27 9.7
AE014296-1250|AAF50567.2| 600|Drosophila melanogaster CG32380-P... 27 9.7
>U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein
DL11 protein.
Length = 184
Score = 141 bits (341), Expect = 3e-34
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +3
Query: 153 KSGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 332
+SGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL
Sbjct: 33 ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 92
Query: 333 KVREYELRRD 362
KVREYELRR+
Sbjct: 93 KVREYELRRE 102
Score = 31.1 bits (67), Expect = 0.45
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 107 NLHIRKLCLNICXSE 151
+LHIRKLCLNIC E
Sbjct: 19 DLHIRKLCLNICVGE 33
>AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p
protein.
Length = 184
Score = 141 bits (341), Expect = 3e-34
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +3
Query: 153 KSGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 332
+SGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL
Sbjct: 33 ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 92
Query: 333 KVREYELRRD 362
KVREYELRR+
Sbjct: 93 KVREYELRRE 102
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 89 SKNVMRNLHIRKLCLNICXSE 151
+KN MR+LHIRKLCLNIC E
Sbjct: 13 AKNPMRDLHIRKLCLNICVGE 33
>AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA
protein.
Length = 184
Score = 141 bits (341), Expect = 3e-34
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +3
Query: 153 KSGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 332
+SGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL
Sbjct: 33 ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 92
Query: 333 KVREYELRRD 362
KVREYELRR+
Sbjct: 93 KVREYELRRE 102
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 89 SKNVMRNLHIRKLCLNICXSE 151
+KN MR+LHIRKLCLNIC E
Sbjct: 13 AKNPMRDLHIRKLCLNICVGE 33
>BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p
protein.
Length = 163
Score = 86.2 bits (204), Expect = 1e-17
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 231 RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRD 362
R VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+
Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRE 81
>AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p
protein.
Length = 1157
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 308 SLSTSNSAMDSNLFITTNTKRPYS 237
SL T+NSA+ SNL +T K+ S
Sbjct: 235 SLETANSALGSNLQVTVTNKQSIS 258
>AY051605-1|AAK93029.1| 600|Drosophila melanogaster GH24627p
protein.
Length = 600
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 241 TVYLAFENTGCWPVSCSSTLAARVSLSPDFLRTTDVQAEFSDMKIPHNIFR 89
+VY+ +TGC P S SST + P ++ D +P F+
Sbjct: 149 SVYMPLASTGCGPPS-SSTCPCPQAECPSYVSDCDTYLRMGGRYVPPEYFK 198
>AE014297-3469|AAS65203.1| 356|Drosophila melanogaster CG33338-PA
protein.
Length = 356
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 118 QKTLPEHLXFGENLVIG*LVPLRCWNSLPANNLYSQRPDTL 240
+ T P + EN+V+ P++CW L ++ + + RPD L
Sbjct: 316 EDTAPVYDQNFENMVL----PVKCWKELVSHEIRNFRPDQL 352
>AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB,
isoform B protein.
Length = 1157
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 308 SLSTSNSAMDSNLFITTNTKRPYS 237
SL T+NSA+ SNL +T K+ S
Sbjct: 235 SLETANSALGSNLQVTVTNKQSIS 258
>AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA,
isoform A protein.
Length = 1157
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 308 SLSTSNSAMDSNLFITTNTKRPYS 237
SL T+NSA+ SNL +T K+ S
Sbjct: 235 SLETANSALGSNLQVTVTNKQSIS 258
>AE014296-1250|AAF50567.2| 600|Drosophila melanogaster CG32380-PA,
isoform A protein.
Length = 600
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 241 TVYLAFENTGCWPVSCSSTLAARVSLSPDFLRTTDVQAEFSDMKIPHNIFR 89
+VY+ +TGC P S SST + P ++ D +P F+
Sbjct: 149 SVYMPLASTGCGPPS-SSTCPCPQAECPSYVSDCDTYLRMGGRYVPPEYFK 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,073,486
Number of Sequences: 53049
Number of extensions: 260324
Number of successful extensions: 681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -