Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J05
(363 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 28 0.039
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.12
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 1.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 1.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 1.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 20 7.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 7.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.9 bits (59), Expect = 0.039
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 135 TSVVRRKSGDRLTRAAKVLEQL--TGQQPVFSKARYTVR--SFGIRRNEKIAVHCTVRGA 302
T++ SGD AA ++ T + V R+ V + RN+ +A+HC +G
Sbjct: 677 TNLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQGV 736
Query: 303 KAEEILER---GLKVREYELRRD 362
I+ + G K EYE R+
Sbjct: 737 PTPTIVWKKATGSKSGEYEELRE 759
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.12
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 255 IRRNEKIAVHCTVRGAKAEEILER---GLKVREYELRRD 362
+ RN+ +A+HC +G I+ + G K EYE R+
Sbjct: 717 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRE 755
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 196 SLPANNLYSQRPDTL 240
+L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 196 SLPANNLYSQRPDTL 240
+L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 196 SLPANNLYSQRPDTL 240
+L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 100 YEESSYQKTLPEHLXFGENLVIG*LVPLRCWNSLP 204
Y ++Y+K ++ + E + I VP+ C N P
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 100 YEESSYQKTLPEHLXFGENLVIG*LVPLRCWNSLP 204
Y ++Y+K ++ + E + I VP+ C N P
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 100 YEESSYQKTLPEHLXFGENLVIG*LVPLRCWNSLP 204
Y ++Y+K ++ + E + I VP+ C N P
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 100 YEESSYQKTLPEHLXFGENLVIG*LVPLRCWNSLP 204
Y ++Y+K ++ + E + I VP+ C N P
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPP 136
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 106 ESSYQKTLPEHLXFGENLVIG*LVPLRCWNSLP 204
+++Y K L ++ + E + + VP+ C N P
Sbjct: 99 DNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPP 131
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.2 bits (40), Expect = 7.8
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 269 KDCCPLHC 292
K+ CPLHC
Sbjct: 344 KNNCPLHC 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,357
Number of Sequences: 438
Number of extensions: 1882
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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