Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_J02
(187 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 85 3e-17
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 85 3e-17
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 85 3e-17
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 85 3e-17
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 85 3e-17
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 85 3e-17
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 85 3e-17
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 85 3e-17
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 63 1e-10
AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine ligase... 30 1.5
AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine ligase... 30 1.5
AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine ligase... 30 1.5
Z33642-1|CAA83923.1| 1021|Homo sapiens leukocyte surface protein... 29 3.5
BC130327-1|AAI30328.1| 1021|Homo sapiens IGSF2 protein protein. 29 3.5
AL445231-1|CAH71959.1| 1021|Homo sapiens immunoglobulin superfam... 29 3.5
AF193048-1|AAG22476.1| 172|Homo sapiens unknown protein. 27 8.1
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 45 MGRMHGPGKGISQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
MGRMH PGKG+SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 47
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +3
Query: 78 SQSRLPYRRSVPTCVKLTADDINEQIFKLGKKGLTP 185
SQS LPYRRSVPT +KLT+DD+ EQI+KL KKGLTP
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 36
>AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 184 GVRPFFPSLKICS--LISSAVSFTQVGTLRRYGSLDWDIPLPGPCIRPILAAFYSIA 20
G R F S K+ S L +AV + RR+ S+ D G C++ + AF+ +A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 184 GVRPFFPSLKICS--LISSAVSFTQVGTLRRYGSLDWDIPLPGPCIRPILAAFYSIA 20
G R F S K+ S L +AV + RR+ S+ D G C++ + AF+ +A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 184 GVRPFFPSLKICS--LISSAVSFTQVGTLRRYGSLDWDIPLPGPCIRPILAAFYSIA 20
G R F S K+ S L +AV + RR+ S+ D G C++ + AF+ +A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>Z33642-1|CAA83923.1| 1021|Homo sapiens leukocyte surface protein
protein.
Length = 1021
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 96 TAASTGIYPCQVRAYDPYWRLFTLSPPRA 10
T TG+Y C+V YD L+ PPRA
Sbjct: 631 TEEETGVYQCEVEVYDRN-SLYNNRPPRA 658
>BC130327-1|AAI30328.1| 1021|Homo sapiens IGSF2 protein protein.
Length = 1021
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 96 TAASTGIYPCQVRAYDPYWRLFTLSPPRA 10
T TG+Y C+V YD L+ PPRA
Sbjct: 631 TEEETGVYQCEVEVYDRN-SLYNNRPPRA 658
>AL445231-1|CAH71959.1| 1021|Homo sapiens immunoglobulin
superfamily, member 2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 96 TAASTGIYPCQVRAYDPYWRLFTLSPPRA 10
T TG+Y C+V YD L+ PPRA
Sbjct: 631 TEEETGVYQCEVEVYDRN-SLYNNRPPRA 658
>AF193048-1|AAG22476.1| 172|Homo sapiens unknown protein.
Length = 172
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +2
Query: 65 WQGYIPVEAAVPPQCPYL--CETN 130
W+ + PV A PP CP L C+T+
Sbjct: 82 WRDFSPVAALAPPFCPRLLFCQTS 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,173,768
Number of Sequences: 237096
Number of extensions: 594202
Number of successful extensions: 1430
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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