Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_I23
         (293 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065541-1|BAC05786.1|  312|Homo sapiens seven transmembrane hel...    28   4.7  
BC029083-1|AAH29083.1|  699|Homo sapiens KIAA0859 protein.             27   8.2  
AL049669-1|CAB41243.1|  543|Homo sapiens hypothetical protein pr...    27   8.2  
AL031864-2|CAI22000.1|  699|Homo sapiens KIAA0859 protein.             27   8.2  
AL031864-1|CAI22001.1|  543|Homo sapiens KIAA0859 protein.             27   8.2  
AK223493-1|BAD97213.1|  707|Homo sapiens KIAA0859 protein (Fragm...    27   8.2  
AF132936-1|AAD27711.1|  642|Homo sapiens CGI-01 protein protein.       27   8.2  
AB020666-1|BAA74882.2|  707|Homo sapiens KIAA0859 protein protein.     27   8.2  

>AB065541-1|BAC05786.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 26  LVLKYSDLFVLLLLPKAVIACIC*ISILSVVTYKNICMLL--YKYLYC 163
           LV   S+LF+L  +   +   IC   + +V+  + +C +L    YLYC
Sbjct: 105 LVFIGSELFILSAMSYDLYVAICNPLLYTVIMSRRVCQVLVAIPYLYC 152


>BC029083-1|AAH29083.1|  699|Homo sapiens KIAA0859 protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 34  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 66


>AL049669-1|CAB41243.1|  543|Homo sapiens hypothetical protein
           protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 34  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 66


>AL031864-2|CAI22000.1|  699|Homo sapiens KIAA0859 protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 34  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 66


>AL031864-1|CAI22001.1|  543|Homo sapiens KIAA0859 protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 34  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 66


>AK223493-1|BAD97213.1|  707|Homo sapiens KIAA0859 protein
           (Fragment) variant protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 42  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 74


>AF132936-1|AAD27711.1|  642|Homo sapiens CGI-01 protein protein.
          Length = 642

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 34  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 66


>AB020666-1|BAA74882.2|  707|Homo sapiens KIAA0859 protein protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 119 TYKNICMLLYKYLYCKHNVCE*GCGKFTVSHRV 217
           TY  +C +L+KY+  +  V   GCG   +S ++
Sbjct: 42  TYLELCGVLHKYIKPREKVLVIGCGNSELSEQL 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,341,151
Number of Sequences: 237096
Number of extensions: 728678
Number of successful extensions: 1016
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)