Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_I22
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 129 2e-30
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 129 2e-30
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 129 2e-30
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 129 2e-30
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 129 2e-30
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 129 2e-30
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 129 2e-30
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 129 2e-30
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 129 2e-30
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 128 7e-30
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 127 9e-30
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 120 1e-27
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 120 1e-27
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 120 1e-27
AB007166-1|BAA25828.1| 71|Homo sapiens ribosomal protein L3 pr... 113 1e-25
BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein. 28 7.6
BC040361-1|AAH40361.1| 1158|Homo sapiens nuclear receptor intera... 28 7.6
AL163207-1|CAB90396.1| 1158|Homo sapiens nuclear factor protein. 28 7.6
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr... 28 7.6
AF248484-1|AAF62185.1| 1158|Homo sapiens nuclear factor RIP140 p... 28 7.6
AF127577-1|AAF35255.1| 1158|Homo sapiens nuclear factor RIP140 p... 28 7.6
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 315 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 374
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 375 QTMEEKKAFMGPLKKDRIAKE 395
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 168 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 227
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 228 QTMEEKKAFMGPLKKDRIAKE 248
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 291 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 350
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 351 QTMEEKKAFMGPLKKDRIAKE 371
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 209 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 268
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 269 QTMEEKKAFMGPLKKDRIAKE 289
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 129 bits (312), Expect = 2e-30
Identities = 61/81 (75%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LKKDRI +E
Sbjct: 380 QTMEEKKAFMGPLKKDRIAKE 400
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 128 bits (308), Expect = 7e-30
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 320 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIREE 117
QT +K AFMG LK+DRI +E
Sbjct: 380 QTMEEKKAFMGPLKEDRIAKE 400
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 127 bits (307), Expect = 9e-30
Identities = 60/78 (76%), Positives = 65/78 (83%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
F HYGEV NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRF
Sbjct: 265 FVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRF 324
Query: 179 QTPADKAAFMGTLKKDRI 126
QT +K AFMG LKKDRI
Sbjct: 325 QTMEEKKAFMGPLKKDRI 342
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 120 bits (290), Expect = 1e-27
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
FPHYGEVNNDFVM+KGC G KKRVITLRKSL VH R A+E I KFIDT SKFGHGRF
Sbjct: 320 FPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIRE 120
QT +K AFMG KK +E
Sbjct: 380 QTAQEKRAFMGPQKKHLEKE 399
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 120 bits (290), Expect = 1e-27
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
FPHYGEVNNDFVM+KGC G KKRVITLRKSL VH R A+E I KFIDT SKFGHGRF
Sbjct: 320 FPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRF 379
Query: 179 QTPADKAAFMGTLKKDRIRE 120
QT +K AFMG KK +E
Sbjct: 380 QTAQEKRAFMGPQKKHLEKE 399
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 120 bits (290), Expect = 1e-27
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = -1
Query: 359 FPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRF 180
FPHYGEVNNDFVM+KGC G KKRVITLRKSL VH R A+E I KFIDT SKFGHGRF
Sbjct: 319 FPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRF 378
Query: 179 QTPADKAAFMGTLKKDRIRE 120
QT +K AFMG KK +E
Sbjct: 379 QTAQEKRAFMGPQKKHLEKE 398
>AB007166-1|BAA25828.1| 71|Homo sapiens ribosomal protein L3
protein.
Length = 71
Score = 113 bits (273), Expect = 1e-25
Identities = 54/70 (77%), Positives = 59/70 (84%)
Frame = -1
Query: 335 NDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINSKFIDTASKFGHGRFQTPADKAA 156
NDFVM+KGC +G KKRV+TLRKSL V TKR ALEKI+ KFIDT SKFGHGRFQT +K A
Sbjct: 1 NDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKA 60
Query: 155 FMGTLKKDRI 126
FMG LKKDRI
Sbjct: 61 FMGPLKKDRI 70
>BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein.
Length = 1976
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 72 SSRLCR-CSWNCSSCSFFTNTILLEC 146
S+ C+ C W+CS+CS T L+C
Sbjct: 951 STNTCKECDWSCSACSGPLKTDCLQC 976
>BC040361-1|AAH40361.1| 1158|Homo sapiens nuclear receptor
interacting protein 1 protein.
Length = 1158
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 69 KSSRLCRCS--WNCSSCSFFTNTILLECTHKCSLISRRLEATMPKFGSRINEL*IDLLQC 242
K +RL + S WN + +++I+ K +L++ +++ +PK G + + L LLQ
Sbjct: 82 KKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDS-VPK-GKQDSTLLASLLQS 139
Query: 243 CSLSVHTKRLSQSDDTFLRSHATALDHHKVIV 338
S + T LSQ L+ AL H + V
Sbjct: 140 FSSRLQTVALSQQIRQSLKEQGYALSHDSLKV 171
>AL163207-1|CAB90396.1| 1158|Homo sapiens nuclear factor protein.
Length = 1158
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 69 KSSRLCRCS--WNCSSCSFFTNTILLECTHKCSLISRRLEATMPKFGSRINEL*IDLLQC 242
K +RL + S WN + +++I+ K +L++ +++ +PK G + + L LLQ
Sbjct: 82 KKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDS-VPK-GKQDSTLLASLLQS 139
Query: 243 CSLSVHTKRLSQSDDTFLRSHATALDHHKVIV 338
S + T LSQ L+ AL H + V
Sbjct: 140 FSSRLQTVALSQQIRQSLKEQGYALSHDSLKV 171
>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix protein
protein.
Length = 4007
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 72 SSRLCR-CSWNCSSCSFFTNTILLEC 146
S+ C+ C W+CS+CS T L+C
Sbjct: 951 STNTCKECDWSCSACSGPLKTDCLQC 976
>AF248484-1|AAF62185.1| 1158|Homo sapiens nuclear factor RIP140
protein.
Length = 1158
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 69 KSSRLCRCS--WNCSSCSFFTNTILLECTHKCSLISRRLEATMPKFGSRINEL*IDLLQC 242
K +RL + S WN + +++I+ K +L++ +++ +PK G + + L LLQ
Sbjct: 82 KKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDS-VPK-GKQDSTLLASLLQS 139
Query: 243 CSLSVHTKRLSQSDDTFLRSHATALDHHKVIV 338
S + T LSQ L+ AL H + V
Sbjct: 140 FSSRLQTVALSQQIRQSLKEQGYALSHDSLKV 171
>AF127577-1|AAF35255.1| 1158|Homo sapiens nuclear factor RIP140
protein.
Length = 1158
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 69 KSSRLCRCS--WNCSSCSFFTNTILLECTHKCSLISRRLEATMPKFGSRINEL*IDLLQC 242
K +RL + S WN + +++I+ K +L++ +++ +PK G + + L LLQ
Sbjct: 82 KKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDS-VPK-GKQDSTLLASLLQS 139
Query: 243 CSLSVHTKRLSQSDDTFLRSHATALDHHKVIV 338
S + T LSQ L+ AL H + V
Sbjct: 140 FSSRLQTVALSQQIRQSLKEQGYALSHDSLKV 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,191,883
Number of Sequences: 237096
Number of extensions: 688133
Number of successful extensions: 1670
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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