Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_I15
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL391728-2|CAH73692.1| 1495|Homo sapiens leucine rich repeat con... 29 4.1
AL391728-1|CAH73691.1| 1537|Homo sapiens leucine rich repeat con... 29 4.1
AL359412-2|CAH74019.1| 1495|Homo sapiens leucine rich repeat con... 29 4.1
AL359412-1|CAH74018.1| 1537|Homo sapiens leucine rich repeat con... 29 4.1
AL158840-2|CAH70975.1| 1495|Homo sapiens leucine rich repeat con... 29 4.1
AL158840-1|CAH70974.1| 1537|Homo sapiens leucine rich repeat con... 29 4.1
AL157948-2|CAI22426.1| 1495|Homo sapiens leucine rich repeat con... 29 4.1
AL157948-1|CAI22425.1| 1537|Homo sapiens leucine rich repeat con... 29 4.1
AL117353-1|CAI23423.1| 1495|Homo sapiens leucine rich repeat con... 29 4.1
AF434715-1|AAL28133.1| 1537|Homo sapiens densin-180 protein. 29 4.1
DQ315369-1|ABC41928.1| 642|Homo sapiens G protein-coupled recep... 27 9.5
AY140953-1|AAN46667.1| 708|Homo sapiens G-protein coupled recep... 27 9.5
AL356421-1|CAI15578.1| 708|Homo sapiens G protein-coupled recep... 27 9.5
AB065684-1|BAC05907.1| 638|Homo sapiens seven transmembrane hel... 27 9.5
>AL391728-2|CAH73692.1| 1495|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1495
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 276 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 329
>AL391728-1|CAH73691.1| 1537|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1537
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 271 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
>AL359412-2|CAH74019.1| 1495|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1495
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 276 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 329
>AL359412-1|CAH74018.1| 1537|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1537
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 271 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
>AL158840-2|CAH70975.1| 1495|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1495
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 276 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 329
>AL158840-1|CAH70974.1| 1537|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1537
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 271 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
>AL157948-2|CAI22426.1| 1495|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1495
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 276 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 329
>AL157948-1|CAI22425.1| 1537|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1537
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 271 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
>AL117353-1|CAI23423.1| 1495|Homo sapiens leucine rich repeat
containing 7 protein.
Length = 1495
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 276 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 329
>AF434715-1|AAL28133.1| 1537|Homo sapiens densin-180 protein.
Length = 1537
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 259 SIINIYKITSLKY---QLFVLKHPF*YIEFLEEVHSTCLFIKSIYTTIGTMYSL 107
SI + K+T+LK QL +L + + LEE +C ++S+ +TIG ++SL
Sbjct: 271 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
>DQ315369-1|ABC41928.1| 642|Homo sapiens G protein-coupled receptor
111 protein.
Length = 642
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 277 LTDTNSSIINIYKITSLKYQLFVLKHP 197
+ D NSS I ++ + S +LF+ KHP
Sbjct: 188 IPDRNSSYILLHSVNSFARRLFIDKHP 214
>AY140953-1|AAN46667.1| 708|Homo sapiens G-protein coupled receptor
GPR111 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 277 LTDTNSSIINIYKITSLKYQLFVLKHP 197
+ D NSS I ++ + S +LF+ KHP
Sbjct: 256 IPDRNSSYILLHSVNSFARRLFIDKHP 282
>AL356421-1|CAI15578.1| 708|Homo sapiens G protein-coupled receptor
111 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 277 LTDTNSSIINIYKITSLKYQLFVLKHP 197
+ D NSS I ++ + S +LF+ KHP
Sbjct: 256 IPDRNSSYILLHSVNSFARRLFIDKHP 282
>AB065684-1|BAC05907.1| 638|Homo sapiens seven transmembrane helix
receptor protein.
Length = 638
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 277 LTDTNSSIINIYKITSLKYQLFVLKHP 197
+ D NSS I ++ + S +LF+ KHP
Sbjct: 186 IPDRNSSYILLHSVNSFARRLFIDKHP 212
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,571,155
Number of Sequences: 237096
Number of extensions: 634282
Number of successful extensions: 741
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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