Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_I13
(531 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 41 1e-04
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.081
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 31 0.14
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 31 0.14
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 30 0.25
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.33
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.33
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.57
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 28 0.76
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 1.00
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.00
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.3
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 27 1.7
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.7
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.7
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.7
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.3
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 27 2.3
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.0
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.0
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 4.0
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.0
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 5.3
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 5.3
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 5.3
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 5.3
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 5.3
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 5.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 5.3
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 7.0
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 7.0
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 7.0
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.0
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 9.3
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 9.3
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 9.3
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 9.3
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.3
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.3
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 40.7 bits (91), Expect = 1e-04
Identities = 34/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 162 KHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 341
K +DF+K I + +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 342 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 491
E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 33.9 bits (74), Expect = 0.015
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +3
Query: 153 DLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 332
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 333 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL--QTAIQNTLKESQNLAKEVGV 506
K K L Q + R ED+ K + E +L E L Q +++L +++N E+
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQKESSLLDAKN---ELEH 1446
Query: 507 NMDQTSQK 530
+D TS+K
Sbjct: 1447 MLDDTSRK 1454
Score = 24.6 bits (51), Expect = 9.3
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Frame = +3
Query: 9 SLADLATSLRSRTDSDTAMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKT 188
SL++ +LRS DS ++ +C + V + A N L+D + D +
Sbjct: 1640 SLSEDLRTLRSLEDSVASLQKECKIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRR 1699
Query: 189 ISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN 368
++ + S + L+ L+E ++ + + L G L + K +++L++
Sbjct: 1700 RDDRCEHL--SGKLKKLHSQLEEQHETFFRAEQQRMTQL-GFLKETVKKQEKLLKKLNLR 1756
Query: 369 LERTVED-----LRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAK 494
E+ + D+EK+ L E+L N ++ SQ L K
Sbjct: 1757 QEQLIPRSSILVYESYIRDIEKEIIVLQERL-----NGIELSQQLPK 1798
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.5 bits (68), Expect = 0.081
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +3
Query: 180 QKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA 359
Q+ + Q + +S E++ K + ++++ L+N L +A + E
Sbjct: 986 QRIVILQDEIASSSLRCENITKDSETRVALLLEENKHLNNELSSH-RNAEKQHLEKENDY 1044
Query: 360 RQNLERTVEDLRKAHPDVEKQ------ATALHEKLQTAIQNTLKESQNLAKEVGV 506
+Q L EDLRK D EK+ A + +KL+ L++ ++L KE+ +
Sbjct: 1045 KQQLLLVTEDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 26.6 bits (56), Expect = 2.3
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 270 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 449
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.7 bits (66), Expect = 0.14
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +3
Query: 324 ANGKAKEV--LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ--- 482
A K KE+ LQQ R NLER +D+ +E+ A EK + +QN +K S+
Sbjct: 237 ARNKQKEINILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPI 295
Query: 483 NLAKEVGVN 509
N A G+N
Sbjct: 296 NAADLEGIN 304
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 30.7 bits (66), Expect = 0.14
Identities = 25/116 (21%), Positives = 52/116 (44%)
Frame = +3
Query: 177 FQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQ 356
+Q S NL + N L++ L + +++ S+++ L + + K E L++
Sbjct: 524 YQNASSADNNLGSSLPNVVPLSRGLTQSNETS-NTFPAASSNISSQLRELHTKIDE-LRE 581
Query: 357 ARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTS 524
N +R + +E A+ ++E++QT ++L S ++ G QTS
Sbjct: 582 TVSNFRADYNSIRTSLNQLEA-ASGINERIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.9 bits (64), Expect = 0.25
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 18/135 (13%)
Frame = +3
Query: 114 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNLIVNSKNTESLNKALKEGSDSMV 275
A+ +DA T L +L++ T QF N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 276 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 419
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 420 QATALHEKLQTAIQN 464
++ + + + + N
Sbjct: 185 ESEVSFQTISSRVDN 199
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.5 bits (63), Expect = 0.33
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +3
Query: 204 NLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTV 383
++ +N S++ L + D + S + NG A+E+ A + L V
Sbjct: 26 DVALNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCV 82
Query: 384 EDLRKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 491
E+LRKA D+E++ L + KL +N + LA
Sbjct: 83 EELRKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 348 LQQARQNLERTVEDLRKAHPDVEK 419
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.57
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +2
Query: 209 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 388
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 389 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 493
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.76
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +2
Query: 296 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 466
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 467 TKGEPEPGE 493
T+ E P +
Sbjct: 723 TRQESLPSQ 731
Score = 24.6 bits (51), Expect = 9.3
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +2
Query: 221 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 400
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 401 APRRRETSHRITREAANRHP 460
+ + ET H ++ P
Sbjct: 762 SQQTTETKHLRKESIPSKQP 781
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.3 bits (60), Expect = 0.76
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 NKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD--- 410
++ L+E ++ +E L + +A KA++ L+Q + E L K H +
Sbjct: 28 DRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAI 86
Query: 411 VEKQATALHEKLQTAIQNTLKESQNL 488
E++ + EKL ++ K S+ L
Sbjct: 87 TEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 27.9 bits (59), Expect = 1.00
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 174 DFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 350
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 351 QQARQNLERTVED 389
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.00
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 222 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 380
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 367 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 248
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 1.3
Identities = 25/127 (19%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +3
Query: 120 VRRDAPNTILQDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSN 299
++++ + +Q K Q+ ++ E+F L TE+ + L + + ++ +++++L N
Sbjct: 845 LKQELRHDFVQFSGKKEQELSRSF-EKFGL-----GTETKHDILAQRNRNVSEKMNDLEN 898
Query: 300 SLQGALTDANGKAKEVLQQARQN----LERTVEDLRKAHPDVEKQATALHEKLQTAIQNT 467
+ Q + + K + + LE+T+EDL+ A D K L + + + + T
Sbjct: 899 AAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLKLALQDELKNRNLLMDDISSYNKQT 958
Query: 468 LKESQNL 488
K + +
Sbjct: 959 TKLQEKI 965
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 226 FFELTIKLNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 110
+ E+T K N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +3
Query: 351 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 482
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 69 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 176
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.1 bits (57), Expect = 1.7
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 132 APNTILQDLEKHAQDFQKT--ISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 305
A + +++ HA+ + T ISE V +TES N+A+K+ D+ ++ +SE L
Sbjct: 159 ATDICVKETALHARHWYNTYIISEA----VKGSSTESHNQAIKDFRDAKIEVISEKDPIL 214
Query: 306 Q 308
Q
Sbjct: 215 Q 215
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 372 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 479
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.6 bits (56), Expect = 2.3
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +3
Query: 114 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNL--IVNSKNTESLNKALKEGSDSMVQQVS 287
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 288 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 452
+ NSL +L+ ++ +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 453 AIQNTLKESQNLAKE 497
A++N L+ + K+
Sbjct: 192 AMENVLQSLNAMGKK 206
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 3.0
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +3
Query: 147 LQDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 320
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 321 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 449
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 3.0
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 231 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 410
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 411 V-EKQATALHEKLQTAIQNTLK 473
V + Q+ K +Q T++
Sbjct: 880 VLQLQSNITELKQDITLQRTVR 901
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 327 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 455
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.8 bits (54), Expect = 4.0
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +3
Query: 189 ISEQFNLIVNSKNTESLNKALK--EGSDSMVQQVSELSNSLQGALTDANGKAKEV--LQQ 356
+SEQ + + S+NTE L L + S+ + L+ L N K +V L +
Sbjct: 1112 VSEQATMAMLSQNTEELEDLLDTVTSFSAFCSDYSKQIDYLEACLVRINAKRIQVTRLLK 1171
Query: 357 ARQN--LERTVEDLRKAHPDVEKQATALHEKLQTAIQN 464
A N E+ +E LR+ P+ ++ L K++ +++
Sbjct: 1172 ALTNPAFEKQME-LRQLGPEALRRQKELRLKMEKVLKS 1208
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 315 LTDANGKAKEVLQQARQN 368
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 145 IVLGASR-RTIAP*ARATQANNTKHLAAMAVSES 47
+ LG SR TI+P RA Q++ ++HLA + E+
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLAEFWMLEA 247
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 5.3
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 189 ISEQFNLIV-NSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 359
I +Q N + N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 5.3
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +3
Query: 141 TILQDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 320
TIL L + Q F+K I+ + SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 321 DANGKAKEVLQQARQNLERTVEDLRK 398
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.3
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 237 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 416
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 417 KQATALHEKLQTAI-QNTLKES-QNLAKEV 500
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.4 bits (53), Expect = 5.3
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 99 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDS 269
+L GA V ++ I K DF K I FN+ + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 26 NFASKSHRLRHRHGRQVLRVVRLRCPRSRSDGP 124
N S+ R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 5.3
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Frame = +3
Query: 252 KEGSDSMVQQVSELSNSLQGALTDANG------KAKEVLQQARQNLERTVEDLRKAHPDV 413
KE SD + + E+ N L+ L+ + + Q N+ ++ + ++ D
Sbjct: 410 KENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANIT-SINERKENLTDK 468
Query: 414 EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTS 524
K KL+++I+N + K +G MD+ +
Sbjct: 469 RKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNT 505
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 388 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 239
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 7.0
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 333 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 491
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 492 KEVGVNMDQTSQK 530
K++ T QK
Sbjct: 188 KDMEQENASTIQK 200
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 243 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 407
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 370 WSAQSRISARRTPTSRNKPPHYTRSCKPP 456
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 150 QDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 317
+D+E+ +KT S L + +SL + L+EG+D + + E L A+
Sbjct: 915 KDIEEELGSNKKTESSNSKLPEFTPLQQSLEEELQEGADEAMLALREKQRELINAI 970
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -3
Query: 460 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 338
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 24.6 bits (51), Expect = 9.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 144 ILQDLEKHAQDFQKTISEQF-NLIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 320
I ++ K + + T ++ NLI + K +NK L E + Q + L S+ G L
Sbjct: 608 IADEVVKFVEHYSSTFDQELLNLINDEKWQNFVNKTLVETRNRDNQLLGGLEPSMVGYLE 667
Query: 321 D 323
D
Sbjct: 668 D 668
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.6 bits (51), Expect = 9.3
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 231 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 410
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLEN--PDLIAALRQDKGQNLQHLQEHYNI 136
Query: 411 VEKQATALHEKLQ 449
++ L++ Q
Sbjct: 137 TPERIAVLYKFAQ 149
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 9.3
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +2
Query: 350 PTSSP--ELGAHSRGSPQG 400
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 138 NTILQDLEKHAQDFQKTISEQFNLIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 305
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,949,483
Number of Sequences: 5004
Number of extensions: 35039
Number of successful extensions: 217
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 218398248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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