Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_I09
(381 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 36 0.003
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 33 0.015
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 31 0.061
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 31 0.081
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.11
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 30 0.14
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 29 0.19
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.25
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 29 0.25
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 29 0.33
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 0.43
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 0.43
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 0.43
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 0.57
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.75
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 0.75
SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein Usp102|Schi... 27 0.99
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 27 1.3
SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces ... 27 1.3
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 27 1.3
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 1.3
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 1.7
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 26 1.7
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 26 1.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 1.7
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 26 1.7
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 26 1.7
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 1.7
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 26 2.3
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 26 2.3
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 26 2.3
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 3.0
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 3.0
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 25 3.0
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 5.3
SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces pombe... 24 7.0
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 24 7.0
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 24 7.0
SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyc... 24 7.0
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 24 7.0
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 24 7.0
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 24 7.0
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 24 7.0
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 24 9.3
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 24 9.3
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 24 9.3
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 24 9.3
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 24 9.3
SPBC19G7.13 |trf1||telomeric DNA binding factor Trf1|Schizosacch... 24 9.3
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 35.5 bits (78), Expect = 0.003
Identities = 26/121 (21%), Positives = 60/121 (49%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATA 192
KE+ +RR+ +AE+ ++ + + +KK +R Q K+++ R++++
Sbjct: 608 KEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQK 667
Query: 193 EERRPQPSKKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKKQACR 372
++ R + KK+ ++ A E RL+ ++ L ER+R++ E++++ R
Sbjct: 668 QKEREKKLKKQQQEADREKMAREQRLREEEEKR------ILEERKRREKLDKEEEERRRR 721
Query: 373 E 375
E
Sbjct: 722 E 722
Score = 30.7 bits (66), Expect = 0.081
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDC 185
R++++ KE+ +RR+ +AE+ + + + RKK +R Q K+++
Sbjct: 598 RDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQEL 657
Query: 186 NR--RRKKTATIEERRSWKREDCNRRRRKTA 272
R R +K E + K++ R K A
Sbjct: 658 ERQKREEKQKQKEREKKLKKQQQEADREKMA 688
Score = 30.3 bits (65), Expect = 0.11
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTA-IAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKED 182
++ER L+ ++++ R +KK +A+E Q + E + + A +R+ + KK +
Sbjct: 583 KQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKRE 642
Query: 183 CNR-RRKKTATIEERRSWKREDCNRRRRK 266
R +R++ +E KRE+ +++ +
Sbjct: 643 EQRLKREQEKKQQELERQKREEKQKQKER 671
Score = 28.3 bits (60), Expect = 0.43
Identities = 17/88 (19%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEE--RRPQPPKKED 182
EE + ++E R K+ ++++L+ K+E+ +RR+ AE+ ++ K+++
Sbjct: 577 EEENKRKQERELKKIREKEKKRDKKKQLKLAKEEE-RQRREAERLAEQAAQKALEAKRQE 635
Query: 183 CNRRRKKTATIEERRSWKREDCNRRRRK 266
R++++ ++ + K+++ R++R+
Sbjct: 636 EARKKREEQRLKREQEKKQQELERQKRE 663
Score = 26.6 bits (56), Expect = 1.3
Identities = 22/122 (18%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEE----RRPQPPK 173
+EE R + + + +K A+ + K+E+ +R++ +E +R + K
Sbjct: 608 KEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQK 667
Query: 174 KEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRK 353
+++ ++ KK +R RE R + +ER L K ++ + L ++
Sbjct: 668 QKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKE 727
Query: 354 KK 359
+
Sbjct: 728 SE 729
Score = 26.2 bits (55), Expect = 1.7
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 ERRLQSPKKEDCNRRRK-KTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 188
ER+ + K++ R +K K E R + +++ +K E +R + KE+
Sbjct: 658 ERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEE 717
Query: 189 RRRKKTATIEERRSWKR 239
RRR++ E +R
Sbjct: 718 RRRRELLEKESEEKERR 734
Score = 25.8 bits (54), Expect = 2.3
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +1
Query: 31 RRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQ 210
R K+ ++++L+ K E+ RR+ + AE+ + + + + RKK +R Q
Sbjct: 592 REKEKKRDKKKQLKLAKEEERQRREAE-RLAEQAAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 211 PSKKEGAGREK 243
K++ R+K
Sbjct: 651 EKKQQELERQK 661
Score = 25.4 bits (53), Expect = 3.0
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +1
Query: 4 RGKKEDCNRRRKKTAIAEER--RLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 177
R +K+ R KK ++ R + + + ++K E +R + KE+ RRR+
Sbjct: 662 REEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRR 721
Query: 178 ----KTATAEERRPQPSK 219
K + +ERR + +K
Sbjct: 722 ELLEKESEEKERRLREAK 739
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 33.1 bits (72), Expect = 0.015
Identities = 17/90 (18%), Positives = 40/90 (44%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTAT 189
++ D + R+K + E+++ + + +++ EE++L+ + ++ R +
Sbjct: 28 RRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLKYEEKKLRISRLANKESSRNEELL 87
Query: 190 AEERRPQPSKKEGAGREKTATAEEGRLQPP 279
E P P+ K K + +E RL P
Sbjct: 88 TETTTPSPAVKASPASTKLSVSENDRLSIP 117
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 31.1 bits (67), Expect = 0.061
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 52 AEERRLQSPKNEDCNRRKKKTATA-EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEG 228
A++ + K D KK+T EE + +PP+ E++ + K + +EG
Sbjct: 74 ADDAKGAQGKGADEKEEKKETIQPPEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEG 133
Query: 229 AGREKTATAEEGRLQPPMKE 288
G E+ EE + P+++
Sbjct: 134 -GEEEEEEEEEEEITDPLEK 152
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 30.7 bits (66), Expect = 0.081
Identities = 22/92 (23%), Positives = 49/92 (53%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCN 188
E+ R+Q +KE R ++ A+ +E++ + + ++ R++ + E R+ Q ED
Sbjct: 872 EDARIQR-EKEKARRLAEEEALLKEKQERERQLQE-ERQKMQEEVLEWRKSQQKASED-- 927
Query: 189 RRRKKTATIEERRSWKREDCNRRRRKTATADE 284
+ EE++S K++ +R++RK+ + E
Sbjct: 928 --DMSLSDDEEKQSGKKKKKDRKKRKSKSKQE 957
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.11
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDC 185
+ E+ Q ++E R ++K A + + L+ +KE R +++ EER + +KE+
Sbjct: 99 KREKERQQREQEKKLREQEKIAAKKMKELEKLEKERI-RLQEQQRRKEERDQKLREKEEA 157
Query: 186 NRRRKKTATIEERRSWK 236
R R++ +ER+ K
Sbjct: 158 QRLRQEQILNKERQQLK 174
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 29.9 bits (64), Expect = 0.14
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +3
Query: 60 KKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT--ATIEERRSW 233
KK A+ E+ + +P KK + +KK AE+ K ++ KK+ A E +
Sbjct: 159 KKNAVVEKGKSKPSKKSV--KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAV 216
Query: 234 KREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTS 365
+ED R+K+ ++ + S + D +++KK+S
Sbjct: 217 IKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKKTKEKKSS 260
Score = 26.6 bits (56), Expect = 1.3
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 28 RRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRP 207
+ +KK +AE+ + K ++ KK++ A KED+ RKK+ ++ P
Sbjct: 177 KAKKKLRLAEKPASNNSKAGKSSQESKKSSKAPAESAAAVIKEDKVSDRKKSKKKPKKTP 236
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 29.5 bits (63), Expect = 0.19
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 31 RRKKTAIAEERRLQSPKNEDCNRRKK--KTATAEERRLQPPKKEDRNRRRKKTATAEE 198
R +K E +RL+ E+ +KK K AEE+RLQ + + + +++A A++
Sbjct: 713 RERKEQAKEAKRLKKLAKEEKRLKKKEEKARKAEEKRLQKERAKYAKQMSRESAHADQ 770
Score = 25.8 bits (54), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 64 RLQSPKN-EDCNRRKKKTATAE--ERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAG 234
R+ SP+ E+ RR +E ER Q +++++ + K+ + + KKE
Sbjct: 683 RVISPEELEEIARRNVDPMVSELSERAAQERERKEQAKEAKRLKKLAKEEKRLKKKE--- 739
Query: 235 REKTATAEEGRLQ 273
EK AEE RLQ
Sbjct: 740 -EKARKAEEKRLQ 751
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Frame = +1
Query: 28 RRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEER-----RLQPP----KKEDRNRRRKK 180
++ +K AEE+RLQ + + + +++A A++ + PP + E + ++
Sbjct: 737 KKEEKARKAEEKRLQKERAKYAKQMSRESAHADQAIANTGPVAPPYFEHETEPSHYEEEE 796
Query: 181 TATAEERRPQPSK-KEGAGREKTATAEE 261
EERR + S E +G + E+
Sbjct: 797 EEEPEERREESSHFSESSGNNEFEETEQ 824
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.25
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 31 RRKKTAIAEERRLQSPKN---EDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEER 201
++ KT++ + + + K E ++ KK T A + + K D + ++ K
Sbjct: 3 KKDKTSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRAS 62
Query: 202 RPQPSKKEGAGREKTATAEE 261
P+PSKK ++K+ EE
Sbjct: 63 SPEPSKKSVKKQKKSKKKEE 82
Score = 24.2 bits (50), Expect = 7.0
Identities = 13/66 (19%), Positives = 25/66 (37%)
Frame = +1
Query: 73 SPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTAT 252
S +E + ++ ++ + + +++K A E RP K +T T
Sbjct: 205 SSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNETCT 264
Query: 253 AEEGRL 270
GRL
Sbjct: 265 VFVGRL 270
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 29.1 bits (62), Expect = 0.25
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 57 RKKTAIAEERRLQPPKKEDCNRRRK-KTATAEERRPQPPK-----KEDCNRRRKKTATIE 218
++K+ I EE + P ++ N TA + + K +E ++RRK +
Sbjct: 52 QRKSEIEEEEDIDPRYQDPDNEVALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQ 111
Query: 219 ERRSWKREDCNRRRRKTATAD-ERGLMMILVKSTGASKKEDHLSRKKKTSVPRRK 380
E+ ++ + + + AD +RGL + + + L+RKK+T PRR+
Sbjct: 112 EQLQKEKYEKENPKVSSQFADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRE 166
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.33
Identities = 10/44 (22%), Positives = 27/44 (61%)
Frame = +1
Query: 94 NRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 225
++++K ++E+ + KKE++ R+++ +E++ + KKE
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKE 468
Score = 28.3 bits (60), Expect = 0.43
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 48 NRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRK 200
+++RK +E+ + KKE+ +RRKK A +E++ + KKE +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEAK-KEKKEKKEKKEKKEKKKK 472
Score = 27.9 bits (59), Expect = 0.57
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +3
Query: 117 NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKT 269
+++RK ++E+ + KKE+ RRKK A E++ ++++ +++K+
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEEK--RRKKEAKKEKKEKKEKKEKKEKKKKS 473
Score = 27.1 bits (57), Expect = 0.99
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRK 177
+++RK +E+ ++ K E+ +R+KK A +E++ + KKE + +++K
Sbjct: 425 SKKRKSVESSEKDEDEAAKKEE--KRRKKEA-KKEKKEKKEKKEKKEKKKK 472
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.3 bits (60), Expect = 0.43
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTA-------IAEERRLQPPKKEDCNRRRKKTATAEERRPQ 164
+E + L+ +K+ R + + A ++EE+++ P K N+++K A ++ PQ
Sbjct: 46 KEAKALKKARKQASRRAKAEAAAANNPPGVSEEKKVAIPNKNS-NQQKK----ASKQNPQ 100
Query: 165 PPKKEDCNRRRKKTATIEERRSWKREDCNRRR 260
+ D N + KK ++ + D RRR
Sbjct: 101 NSPETDANLQEKKIFEEKQVSIFSHLDWRRRR 132
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 0.43
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 81 ERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR 260
E +++ PK E K +AEE Q P KE + +A+ E S KR++ N ++
Sbjct: 422 EEKVETPKPE-AQPVSKPKESAEE---QKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQK 477
Query: 261 RKTATADER 287
+T T +R
Sbjct: 478 EETVTQPKR 486
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 0.43
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 31 RRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPP-KKEDRNRRRKKTATAEERRP 207
++KK + R LQ ++D + TAT+E L+ D + ++ + A E
Sbjct: 408 KKKKEREEQVRLLQESADKDAEMNEASTATSENEDLKDDLSLADLSSKKTANSQATENNN 467
Query: 208 QPSKKEGAGREK 243
PSK + K
Sbjct: 468 TPSKAKVKAESK 479
Score = 24.2 bits (50), Expect = 7.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 40 KTAIAEE-RRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAE 195
+ AI EE +++ K +KKK + R LQ +D TAT+E
Sbjct: 387 RQAIREEVAAVEAAKIRADEEKKKKEREEQVRLLQESADKDAEMNEASTATSE 439
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 0.57
Identities = 28/108 (25%), Positives = 52/108 (48%)
Frame = +1
Query: 37 KKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPS 216
K+ EE+R++ + +K+ A EE R + + + + + RKK + + S
Sbjct: 257 KRAREEEEQRIREEEARIAEE-EKRLAEVEEARKEEARLKKKEKERKKKEEMKAQGKYLS 315
Query: 217 KKEGAGREKTATAEEGRLQPPMKED***FL*SLRERRRKKITYLEKKK 360
KK+ +E+ A A+ RLQ ++ S E+++K + Y KKK
Sbjct: 316 KKQ---KEQQALAQR-RLQQMLESGVRVAGLSNGEKKQKPV-YTNKKK 358
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 0.75
Identities = 15/73 (20%), Positives = 29/73 (39%)
Frame = +3
Query: 117 NRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRRRKTATADERGLM 296
++ K + +P K + +R K ++ + K+ED R R + + + +
Sbjct: 591 SKHESKHKRDSKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRSRSHSVSKPDSSKL 650
Query: 297 MILVKSTGASKKE 335
TGA K E
Sbjct: 651 RTWTDRTGAFKVE 663
Score = 24.6 bits (51), Expect = 5.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 121 AEERRLQPPKKEDRNRRRKKTATAEERRPQP 213
+ +R + KK+DR R+ + E+ P P
Sbjct: 731 SHDREKEKEKKKDREHRKHRETEEEDEGPPP 761
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 0.75
Identities = 22/94 (23%), Positives = 32/94 (34%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDC 185
R +R +P K RR A D R + A A+ P P + E
Sbjct: 38 RSAQRTVTPHKRRALARRNSLARRRSNVFSATTPRDILRMLSR-ALAKNPVPSPAESESS 96
Query: 186 NRRRKKTATIEERRSWKREDCNRRRRKTATADER 287
RR ++ + R N+RR A +R
Sbjct: 97 ERRHTPQTNSQKSQKTPRLSSNKRRTLKNDAKQR 130
>SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein
Usp102|Schizosaccharomyces pombe|chr 2|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 0.99
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 136 LQPPKKEDRNRRR--KKTATAEERRPQPSKKE-----GAGREKTATAEEGRLQP 276
++ KK+ +NRR K+T+ + P+P+ K+ G E+ +T E L P
Sbjct: 119 IETRKKDRKNRREMLKRTSALQPAAPKPTHKKPVPKRNVGAERKSTINEDLLPP 172
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 1.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 144 AEERRPQPPKKEDCNRRRKKT 206
A+ RP PP D NRRR+K+
Sbjct: 80 AQYFRPAPPHPNDRNRRRRKS 100
Score = 25.8 bits (54), Expect = 2.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 121 AEERRLQPPKKEDRNRRRKKT 183
A+ R PP DRNRRR+K+
Sbjct: 80 AQYFRPAPPHPNDRNRRRRKS 100
>SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 26.6 bits (56), Expect = 1.3
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 15 RRLQSPKKEDCNRRRKKTAIAEER-RLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNR 191
++++ ++ + RK+ R R+ P + R+R + + + D R
Sbjct: 16 KKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAEEELAKIETEEEGGDFER 75
Query: 192 RRKKTATIEERRSWKREDCNRRRRKT 269
RR TIEE W + R++++T
Sbjct: 76 RRAWDWTIEESEKWDQR--LRKKKQT 99
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 26.6 bits (56), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 189 RRRKKTATIEERRSWKREDCNRRR 260
RRR++T IE R+ + E+ N+RR
Sbjct: 28 RRRRETQQIEIRKQKREENLNKRR 51
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 1.3
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 ARGKKEDCNRR------RKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDR 162
AR +E+ NR +K AI EER + + ++ +R+ +RR+Q + E+
Sbjct: 798 ARAAEEEANRELHEQEEAQKRAI-EERTRAAREAKEREQREMAEKLERQRRIQQERDEEI 856
Query: 163 NRR-RKKTATAEERRPQPSKKEGAGREKTATA 255
+R+ +K A S GA R A+A
Sbjct: 857 SRKLAEKAAARRANIGASSPSPGAWRRGGASA 888
Score = 24.2 bits (50), Expect = 7.0
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATA 146
EER + + ++ +R + +RR+Q + E+ +R+ + A A
Sbjct: 821 EERTRAAREAKEREQREMAEKLERQRRIQQERDEEISRKLAEKAAA 866
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 1.7
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +1
Query: 79 KNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAE 258
K+ D + R + +ER L+ + R R + R Q ++ + T
Sbjct: 234 KHYDDDMRFDQGHFQDERDLKKYVRTSRQYSRSPSPDFRTRNHQFHSRDSQPITQRHTDI 293
Query: 259 EGRLQPPMKED***FL*SLRERRRKKITYLEKKKQ 363
E RLQ M+++ L E RRKKI LEKK++
Sbjct: 294 ESRLQK-MQDN----AKELDESRRKKIELLEKKER 323
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 1.7
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = +1
Query: 25 NRRRKKTAIAEERRLQSPKNEDC---NRRKKKTATAEERRLQPPKKE----DRNRRRKKT 183
+ R + A E RR Q + +R ++ A AEE RL K+E + +++ +
Sbjct: 252 SEREAREAARELRRQQDNAYQASLARDRERQAFARAEEERLAKEKEEREIVQKKKKQYRA 311
Query: 184 ATAEERRPQPSKKEGAGREKTATAEEGRLQPPMKED 291
A P+PS ++ R + R K+D
Sbjct: 312 WLASNLPPEPSSEDEPARLSIRFPDGSRAVRRFKKD 347
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 26.2 bits (55), Expect = 1.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 98 RLQSSFFGDCSLLSSAIAVFFLRRLQSSFFP 6
R ++ F DC ++ FF RRL +S P
Sbjct: 51 RTKNLFLNDCKFNKNSFEKFFARRLSNSVAP 81
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 1.7
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPK-KEDCNRRRKKTATAEERRPQPPKKED 182
+ +R + K + + K+ A + +R K K + + K+ A +R +E
Sbjct: 616 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREA---EEK 672
Query: 183 CNRRRKKTATIEERRSWKREDCNRRRRKTATADER 287
R ++ A E KRE +RK +R
Sbjct: 673 AKREAEENAKREAEEKVKRETEENAKRKAEEEGKR 707
Score = 25.4 bits (53), Expect = 3.0
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTAT--AEERRL----QPPKKEDRNRRR 174
+E+ ++R+ +A ++R+Q + R+ ++ A AEE + K+E + +
Sbjct: 519 EEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAK 578
Query: 175 KKTATAEERRPQPSKKEGAGREKTATAEE 261
++ +R + K A AEE
Sbjct: 579 REAEEKAKREAEEKAKREAEENAKREAEE 607
Score = 24.2 bits (50), Expect = 7.0
Identities = 14/87 (16%), Positives = 36/87 (41%)
Frame = +1
Query: 1 ARGKKEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKK 180
A+ + E+ +R + E ++ + + N +++ A+ + K+E + +++
Sbjct: 569 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKRE 628
Query: 181 TATAEERRPQPSKKEGAGREKTATAEE 261
+R + K A + AEE
Sbjct: 629 AEEKAKREAEEKAKREAEEKAKREAEE 655
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 26.2 bits (55), Expect = 1.7
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 78 EERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRR 197
+E+RL+ P D + R+K A + P +K++ R
Sbjct: 104 KEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKDELEEER 143
Score = 25.4 bits (53), Expect = 3.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 124 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREKTA 249
+E+RL+ P D + R+K A + P +K+ E+ A
Sbjct: 104 KEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKDELEEERIA 145
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 26.2 bits (55), Expect = 1.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 97 RRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKEGAGREK 243
+ KKK++ A + R KK R++++ ++RR K+G +K
Sbjct: 178 KEKKKSSDAWKERKDNEKKAMLMRQQRREENLKKRRESKKSKKGKAPKK 226
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 1.7
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 28 RRRKKTAIAEERRLQSPKNEDCNR---RKKKTATAEERRLQPPKKEDRNRRRKKTATAEE 198
R + +++E + + K E+ N+ RK++ E + + K++DR + + T +E
Sbjct: 504 RNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Query: 199 RRPQPSKKEGAGREK 243
R Q +KKE +K
Sbjct: 564 RE-QYAKKENERWDK 577
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.8 bits (54), Expect = 2.3
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +1
Query: 43 TAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKK 222
T AEE + + ++KKK++ +E + KKE + ++ KK ++ + +
Sbjct: 435 TKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDG 494
Query: 223 EGAGREK 243
E ++K
Sbjct: 495 ESPKKKK 501
Score = 25.0 bits (52), Expect = 4.0
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +3
Query: 33 KKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRK 200
+K+ + K A E + + +K+D ++ K + E + PKK+ +++ K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 93 QPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKK 203
+P KKE +++ KK ++++R E+ + +KK
Sbjct: 457 KPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
Score = 23.8 bits (49), Expect = 9.3
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 10 KKEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKK 111
KKE +++ KK ++++R +E+ + KKK
Sbjct: 460 KKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 55 EERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRR 174
+ER+ ++ K E +KK+ + PP++ + R+R
Sbjct: 287 KERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKKRKR 326
Score = 24.6 bits (51), Expect = 5.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 102 KKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKRE 242
KKE+ + RKK AE++ Q KK++ + R K E S KR+
Sbjct: 283 KKEE--KERKKR--AEKKEQQKEKKKEKEKERMKAFIPPEESSKKRK 325
Score = 23.8 bits (49), Expect = 9.3
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 9 EERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRR 128
+ER+ ++ KKE ++K+ + PP++ R+R
Sbjct: 287 KERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKKRKR 326
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.4 bits (53), Expect = 3.0
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 96 PPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEER 224
P +E ++R+K T E + + ++++ RR++ IEE+
Sbjct: 505 PQSREQIQKQRQKAKTKLENQRRDKERQEELRRKEAMQKIEEQ 547
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 4 RGKKEDCNRR--RKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKK-EDRNRRR 174
R ++E NR KK AE +RL K+E+ RRKK+ E++ + + E++ +
Sbjct: 107 RLEQERFNRELLEKKRIEAERQRL---KDEE-ERRKKELMEKEKKEKERIRLIEEQKHKE 162
Query: 175 KKTATAEERRPQPSKKEGAGREK 243
+ ++ + +KE REK
Sbjct: 163 NEQRRLKQEQIDAKRKEEEAREK 185
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 3.0
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 105 KEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEE 221
+E+ + +KT ++++R P+P K +R ++ A +EE
Sbjct: 39 EENSDDDYEKTISSKKRHPRPNSKGVNVKRSRRNAIVEE 77
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 24.6 bits (51), Expect = 5.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 72 IAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKT 206
+ E +LQP KE K T + + P P +ED + R KKT
Sbjct: 475 VVMEPKLQPSVKE-------KKPTKDLQSPLPSVEEDSSNRDKKT 512
>SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 24.2 bits (50), Expect = 7.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 103 KKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSK 219
KKK A +E+ + KE+ R +K+T P+ +K
Sbjct: 311 KKKRAKDDEQYAKRLAKEEEERGKKETPKKASNTPRRNK 349
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 24.2 bits (50), Expect = 7.0
Identities = 7/31 (22%), Positives = 20/31 (64%)
Frame = +1
Query: 124 EERRLQPPKKEDRNRRRKKTATAEERRPQPS 216
++ ++Q P++ + +R+K T+++ P P+
Sbjct: 526 QQTQMQGPQQVQQQAKRRKAYTSQQLNPAPT 556
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 24.2 bits (50), Expect = 7.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 148 KKEDRNRRRKKTATAEERRPQPSKKEGAGREKTATAEEGRL 270
K +D+ RRK+ A EE+ P+ K+ AT E R+
Sbjct: 21 KNKDKLERRKERAKEEEKDPE-KKRLRLSENIPATIESKRV 60
>SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 24.2 bits (50), Expect = 7.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 264 KTATADERGLMMILVKSTGASKKEDHLSRKKKTS 365
KT +ER L++I K+ ++K++ L RK+ ++
Sbjct: 293 KTKQREERALVVIFQKTDPSTKEKFFLIRKRPSA 326
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/93 (21%), Positives = 45/93 (48%)
Frame = +3
Query: 6 REERRLQSPKKEDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDC 185
+ E+R + K+ + +KKT+ L P K E +++KK E ++ KE
Sbjct: 164 KREKRKKHSSKK---KSKKKTSTGS--ALDPKKLEKITKKKKK----EHKKKD---KESS 211
Query: 186 NRRRKKTATIEERRSWKREDCNRRRRKTATADE 284
+++RK ++ +E + K+ + T++ ++
Sbjct: 212 SKKRKSGSSDKEEKKKKKIKLKDKPESTSSVEK 244
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 24.2 bits (50), Expect = 7.0
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 111 DCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIEERRSWKREDCNRRR----RKTATA 278
D +R K++ P +D +R T ++EE ++E NR+R ++ +
Sbjct: 260 DDKKRNHKSSYKRSLSPSTRYHQDRPDKRHGTYSLEEIDKQRKEFENRQRLQKEKEFQKS 319
Query: 279 DERGLMMILVKSTG----ASKKEDHLSRKKKTS 365
E L + ++T S +E +L RKKK +
Sbjct: 320 REAALKIHASRNTTETQVQSARERYLQRKKKAA 352
Score = 23.8 bits (49), Expect = 9.3
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +1
Query: 1 ARGKKEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKK 180
A D +R K++ +R L +R K+ T + +KE NR+R +
Sbjct: 254 ANNSMRDDKKRNHKSSY--KRSLSPSTRYHQDRPDKRHGTYSLEEIDKQRKEFENRQRLQ 311
Query: 181 TATAEERRPQPSKKEGAGREKTAT 252
++ + + K A R T T
Sbjct: 312 KEKEFQKSREAALKIHASRNTTET 335
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 24.2 bits (50), Expect = 7.0
Identities = 18/87 (20%), Positives = 36/87 (41%)
Frame = +3
Query: 39 EDCNRRRKKTAIAEERRLQPPKKEDCNRRRKKTATAEERRPQPPKKEDCNRRRKKTATIE 218
E C+ +++ + ++ + D R+K +AEE + K + T +IE
Sbjct: 384 ESCDASKEQPVLVYISKMVAFSERDLPNHRRKQLSAEEMKLIRSKLSESIESGINTISIE 443
Query: 219 ERRSWKREDCNRRRRKTATADERGLMM 299
E S D N T D++ +++
Sbjct: 444 ENVSSTNSD-NLEGSTTDMDDDKDILI 469
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.2 bits (50), Expect = 7.0
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 52 AEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 225
AE+ + +D +KKK A +E+ + K + + +K A ER+ + + E
Sbjct: 8 AEKAEAAKSRKQD-EEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLE 64
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 23.8 bits (49), Expect = 9.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 99 PKKEDCNRRRKKTATAEERRPQPPKKED 182
P KED + +K T EE PP ++
Sbjct: 2 PPKEDWEKYQKPVDTEEENDKNPPPLDE 29
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 23.8 bits (49), Expect = 9.3
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +3
Query: 231 WKREDCNRRRRKTATADERGLMMILVKSTGASKKEDHLSRKKKTSV 368
W E C ++ K + LV S + K DHL +K S+
Sbjct: 147 WFHEKCLQKTNKGIAIPDAETFEWLVCSECSEKYRDHLLNQKHESI 192
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 23.8 bits (49), Expect = 9.3
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +1
Query: 13 KEDCNRRRKKTAIAEERRLQSPKNEDCNRRKKKTATAEERRLQPPKKED---RNRRRKKT 183
+ED N+ L +N D + +++ + R ++ D R+RRR
Sbjct: 134 EEDMNKIHDAWYAFNSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQARSRRRFSE 193
Query: 184 ATAEERRPQPSKKE 225
T + R K++
Sbjct: 194 ETTQRRAEIKEKRK 207
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 23.8 bits (49), Expect = 9.3
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 129 KKTATAEERRPQPPKKEDCNRRRKKTATIEERRSW-KRE----DCNRRRRKTATAD-ERG 290
K+ E P P K+ N RKK A I ER + KRE + R+R K T + E+
Sbjct: 129 KQQLLLESSEPTPTIKQQFND-RKKNAQIREREALAKREQEMIEDRRQRIKEVTENLEKR 187
Query: 291 LMMILVKST 317
L + K+T
Sbjct: 188 LDDWIAKAT 196
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 23.8 bits (49), Expect = 9.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 124 EERRLQPPKKEDRNRRRKKTATAEERRPQPSKKE 225
+E P K++ + T AE + +PSKK+
Sbjct: 160 DETSYDPRKQKFEQGKNPSTTNAEIEKEEPSKKQ 193
>SPBC19G7.13 |trf1||telomeric DNA binding factor
Trf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 23.8 bits (49), Expect = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 186 NRRRKKTATIEERRSWKRED 245
N K+T + RRSW +E+
Sbjct: 393 NLNNKRTRRVANRRSWTKEE 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,318,425
Number of Sequences: 5004
Number of extensions: 24195
Number of successful extensions: 291
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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