Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_I05
         (105 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L27705-1|AAA61925.1|  297|Drosophila melanogaster succinate dehy...    26   6.1  
AY118923-1|AAM50783.1|  297|Drosophila melanogaster LD23740p pro...    26   6.1  
AE013599-229|AAF57396.1|  297|Drosophila melanogaster CG3283-PA ...    26   6.1  

>L27705-1|AAA61925.1|  297|Drosophila melanogaster succinate
           dehydrogenase iron-proteinsubunit protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 57  RSYLIGYYECI--KCCSTLVP 1
           RS L G YECI   CCST  P
Sbjct: 186 RSKLDGLYECILCACCSTSCP 206


>AY118923-1|AAM50783.1|  297|Drosophila melanogaster LD23740p
           protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 57  RSYLIGYYECI--KCCSTLVP 1
           RS L G YECI   CCST  P
Sbjct: 186 RSKLDGLYECILCACCSTSCP 206


>AE013599-229|AAF57396.1|  297|Drosophila melanogaster CG3283-PA
           protein.
          Length = 297

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -1

Query: 57  RSYLIGYYECI--KCCSTLVP 1
           RS L G YECI   CCST  P
Sbjct: 186 RSKLDGLYECILCACCSTSCP 206


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,984,436
Number of Sequences: 53049
Number of extensions: 28148
Number of successful extensions: 86
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 24,988,368
effective HSP length: 16
effective length of database: 24,139,584
effective search space used: 434512512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)