Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_I04
         (129 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   2.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   4.1  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    19   5.5  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    19   5.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              19   7.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        18   9.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        18   9.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        18   9.6  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 123 PPQNTYIIHDFTCITMQYFP 64
           P  + + +HD   ITM  FP
Sbjct: 150 PKIHVFSLHDNKLITMYRFP 169


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -1

Query: 87  CITMQYFPAFMH 52
           C+T   FP + H
Sbjct: 189 CVTFNAFPTYTH 200


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -1

Query: 93  FTCITMQYFPAFMHSQQMV 37
           F C  + Y+  ++H   +V
Sbjct: 416 FVCFNLMYWIIYLHISDVV 434


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -1

Query: 93  FTCITMQYFPAFMHSQQMV 37
           F C  + Y+  ++H   +V
Sbjct: 416 FVCFNLMYWIIYLHISDVV 434


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 128 ILLHKILTLYMILPASPCNTFP 63
           ILL  ++T  +  P+  C T P
Sbjct: 5   ILLSLLITCLICSPSVHCGTRP 26


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LLHHLLTMHKRGKVLHGDAGKIMYNVSILWRR 126
           LLH   +   R  +L  D  K + +V+  W +
Sbjct: 667 LLHLFGSWSNRPNLLFKDEAKDLVSVNKSWNK 698


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LLHHLLTMHKRGKVLHGDAGKIMYNVSILWRR 126
           LLH   +   R  +L  D  K + +V+  W +
Sbjct: 667 LLHLFGSWSNRPNLLFKDEAKDLVSVNKSWNK 698


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LLHHLLTMHKRGKVLHGDAGKIMYNVSILWRR 126
           LLH   +   R  +L  D  K + +V+  W +
Sbjct: 667 LLHLFGSWSNRPNLLFKDEAKDLVSVNKSWNK 698


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,367
Number of Sequences: 438
Number of extensions: 446
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 23
effective length of database: 136,269
effective search space used:  2589111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)