Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H23
(240 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0083 + 25429958-25429967,25431035-25431144,25431286-254313... 49 5e-07
07_03_0529 - 19107949-19108152,19108857-19109147,19109817-191099... 46 6e-06
07_01_0961 + 8070992-8071015,8071016-8071089,8073051-8073200,807... 43 4e-05
06_03_1475 - 30391555-30391890,30391982-30392233,30392358-303926... 42 5e-05
04_04_0803 - 28165828-28166136,28166257-28166505,28166628-281668... 41 2e-04
02_05_0259 - 27226378-27226398,27226643-27226813,27227063-272272... 40 4e-04
03_04_0019 + 16500877-16501029,16501184-16501240,16501560-165016... 38 0.001
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337... 28 0.92
12_02_1219 + 27096477-27096590,27096704-27097078 27 1.6
04_04_1672 - 35242468-35243235,35243481-35243645 27 1.6
01_01_1008 - 7987936-7988628,7988923-7989102 27 1.6
10_08_1043 + 22524322-22524346,22524931-22525028,22525287-225253... 27 2.1
07_01_0986 - 8314733-8314783,8315895-8318381 27 2.1
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 27 2.1
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 27 2.8
03_05_0267 - 22538631-22539452 26 3.7
02_05_0617 + 30383334-30383579,30383592-30383681,30383772-303839... 26 3.7
06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652 26 4.9
04_03_0845 - 20245836-20246046,20246137-20246219,20246330-202464... 26 4.9
04_03_0133 - 11653859-11653962,11658466-11658979 26 4.9
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 25 6.5
05_03_0650 - 16582296-16583042 25 6.5
04_01_0172 - 1954275-1954533,1954546-1954873,1955772-1956174 25 6.5
03_02_0395 - 8091389-8093119,8093637-8093720,8093754-8094773 25 6.5
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 25 6.5
02_03_0386 + 18404641-18404673,18406366-18406558,18406688-184067... 25 6.5
02_02_0197 + 7689403-7691070 25 6.5
01_06_0193 - 27359575-27361962 25 6.5
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 25 8.5
03_06_0746 + 35961431-35961488,35963941-35964021,35964650-359647... 25 8.5
03_05_1044 + 29908348-29908503,29909495-29909626,29910049-299103... 25 8.5
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 25 8.5
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 25 8.5
>05_06_0083 +
25429958-25429967,25431035-25431144,25431286-25431342,
25431828-25431936,25432329-25432513,25432595-25432683,
25432877-25433132,25433623-25433865,25433955-25434266
Length = 456
Score = 49.2 bits (112), Expect = 5e-07
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 11 NFSVSXXXXXXXXXXXXTREMLKPFDPVLKFFTVKSVIFLSFWQGVALAIL 163
NFS + T+E L+P P+ KF T KS++FL++WQG+A+A L
Sbjct: 196 NFSQTWALYCLIQFYTATKEKLEPIKPLSKFLTFKSIVFLTWWQGIAVAFL 246
>07_03_0529 -
19107949-19108152,19108857-19109147,19109817-19109939,
19110019-19110306
Length = 301
Score = 45.6 bits (103), Expect = 6e-06
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 11 NFSVSXXXXXXXXXXXXTREMLKPFDPVLKFFTVKSVIFLSFWQGVALAILEKAEVI 181
NFSVS + L P P+ KF +K ++F SFWQG AL +L +I
Sbjct: 191 NFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGII 247
>07_01_0961 +
8070992-8071015,8071016-8071089,8073051-8073200,
8073307-8073592,8074077-8074220,8074357-8074665
Length = 328
Score = 42.7 bits (96), Expect = 4e-05
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +2
Query: 65 REMLKPFDPVLKFFTVKSVIFLSFWQGVALAI 160
R++L+P++PV KF +KSV+FL++WQ + AI
Sbjct: 153 RDLLQPYNPVPKFIIIKSVVFLTYWQMLIAAI 184
>06_03_1475 -
30391555-30391890,30391982-30392233,30392358-30392619,
30393232-30393320,30393408-30393592,30393673-30393781,
30393886-30393942,30394047-30394196
Length = 479
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 11 NFSVSXXXXXXXXXXXXTREMLKPFDPVLKFFTVKSVIFLSFWQGVALAIL 163
NFS S ++ L P+ KF T KS++FL++WQGV +A+L
Sbjct: 206 NFSQSWALYCLVQFYAAIKDELAHIKPLAKFLTFKSIVFLTWWQGVVIALL 256
>04_04_0803 -
28165828-28166136,28166257-28166505,28166628-28166889,
28168116-28168204,28168286-28168342,28168443-28168595
Length = 372
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/53 (32%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 62 TREMLKPFDPVLKFFTVKSVIFLSFWQGVALAILEKAEVI-SPIIDADDIPTT 217
T++ L P+ KF + KS++FL++WQGV +AI+ ++ SP+ + ++ ++
Sbjct: 126 TKDELAHIKPLAKFLSFKSIVFLTWWQGVVIAIMYSLGLLRSPLAQSLELKSS 178
>02_05_0259 -
27226378-27226398,27226643-27226813,27227063-27227284,
27227508-27227668,27227933-27227996,27228002-27228194,
27228499-27228587,27228668-27228852,27229671-27229779,
27229880-27229936,27230023-27230175
Length = 474
Score = 39.5 bits (88), Expect = 4e-04
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 62 TREMLKPFDPVLKFFTVKSVIFLSFWQGVALAIL 163
T++ L P+ KF + KS++FL++WQG+ +AI+
Sbjct: 224 TKDELAHIKPLAKFLSFKSIVFLTWWQGIMIAIM 257
>03_04_0019 +
16500877-16501029,16501184-16501240,16501560-16501668,
16501837-16502021,16502103-16502182,16502869-16503085,
16503394-16503633,16503720-16504028
Length = 449
Score = 37.5 bits (83), Expect = 0.001
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 62 TREMLKPFDPVLKFFTVKSVIFLSFWQGVALAIL 163
T E L+ P+ KF + K+++F ++WQG+ +AI+
Sbjct: 210 THEKLQEIRPLAKFISFKAIVFATWWQGLGIAII 243
>12_02_0982 -
25031778-25032122,25032388-25032534,25032693-25033718,
25033758-25034227,25034393-25034471
Length = 688
Score = 28.3 bits (60), Expect = 0.92
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +1
Query: 142 RCSARYPGESGGD---IADNRRGRYTD--NGGYSLGRV 240
RC R+PG G D I+D+ + D +GGY +GRV
Sbjct: 306 RCRLRFPGGIGADDGVISDDDLYGHDDIPDGGYEIGRV 343
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 157 YPGESGGDIADNRRGRYTDNGGYSLGR 237
Y G GG R G Y GGY GR
Sbjct: 112 YGGGGGGGYGQRREGGYGGGGGYGGGR 138
>04_04_1672 - 35242468-35243235,35243481-35243645
Length = 310
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 213 VGISSASIIGDITSAFSRIASATPCQNERKITDLTVKNFSTGSNGFSISL 64
VG S + + + AFSR +A N DL V T NG+ I+L
Sbjct: 180 VGKSKCAFVRPVDDAFSRKMAANCSANPNTKQDLDVVTPITFDNGYYIAL 229
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 89 GRTASASPWWRRGTGTNRIEPSSQR 15
GR S SPWWRR G R+ +R
Sbjct: 223 GRRCSRSPWWRR-RGEARVRRRGRR 246
>10_08_1043 +
22524322-22524346,22524931-22525028,22525287-22525384,
22525878-22525935,22526642-22526743,22526840-22526901,
22527441-22527519,22527669-22527788,22527869-22527982,
22528749-22528883
Length = 296
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 132 ERKITDLTVKNFSTGSNGFSISLVAPR-NRNKP 37
+R +TD K FS GS G I +AP R++P
Sbjct: 133 DRVVTDPLCKPFSMGSGGSQIIWIAPSGGRDRP 165
>07_01_0986 - 8314733-8314783,8315895-8318381
Length = 845
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -2
Query: 239 TRPRLYPPLSVYR---PRRLSAISPPLSP 162
TR L PLS+ R PR LS+ SPP P
Sbjct: 11 TRRPLLAPLSILRTPTPRHLSSSSPPSQP 39
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -1
Query: 213 VGISSASIIGDITSAFSRIASATPCQNERKITDLTVKNFSTGSNGFSISLVAPRNRNKPY 34
VGIS + T + +AS++ + + D++ + S+ + SLV N K
Sbjct: 467 VGISCDLLDDSATCYIAHVASSSISTSCDDLVDMSSSSSSSCVSICDASLVVENNELKEQ 526
Query: 33 RAKLTEKLSSC 1
AKL + L C
Sbjct: 527 VAKLNKSLERC 537
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 104 RTSVRGRTASASPWWRRGTGTNRIEPSSQRSC 9
R + A+ASP W+RG G + S SC
Sbjct: 5 RAAATAAAAAASPLWKRGEGGSSGSGSGCTSC 36
>03_05_0267 - 22538631-22539452
Length = 273
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 145 CSARYPGESGGDIADNRRGRYTDNGGYSLG 234
CS P E+ D+ D G D GG LG
Sbjct: 63 CSRARPRETAADLGDGGGGGLGDGGGGRLG 92
>02_05_0617 +
30383334-30383579,30383592-30383681,30383772-30383901,
30384578-30384591
Length = 159
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 233 PRLYPPLSVYRPRRLSAISPPLSPG*RAL 147
P + PP YRPRR +A P PG R L
Sbjct: 20 PAVSPPSGSYRPRRPAA--PTAPPGSRGL 46
>06_02_0055 + 10986228-10986388,10986717-10986899,10987013-10987652
Length = 327
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 136 LARCSARYPGESGGDIADNRRGRYTDNGGYSLGR 237
LA AR GG +D G D+GG LGR
Sbjct: 159 LATLLARSSSRDGGGSSDGGGGGLGDSGGRRLGR 192
>04_03_0845 -
20245836-20246046,20246137-20246219,20246330-20246470,
20246561-20247421
Length = 431
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 104 RTSVRGRTASASPWWR 57
RTS RGR A+A W+R
Sbjct: 107 RTSFRGRVAAAEAWFR 122
>04_03_0133 - 11653859-11653962,11658466-11658979
Length = 205
Score = 25.8 bits (54), Expect = 4.9
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -1
Query: 213 VGISSASIIGDITSAFSRIASATPCQNERKITDLTVKNFSTGSNGFSISLVAPRNRNKPY 34
VGIS + T + +AS++ + + D++ + ++ + SLV N K
Sbjct: 57 VGISCDLLDDSATCHIAHVASSSISTSCDDLVDMSSSSSNSCVSICDASLVVKNNELKEQ 116
Query: 33 RAKLTEKLSSC 1
AKL + L C
Sbjct: 117 VAKLNKSLERC 127
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 236 RPRLYPPLSVYRPRRLSAISPPLS 165
R RL PP P R A SPP S
Sbjct: 7 RSRLTPPTPAMHPHRKRARSPPAS 30
>05_03_0650 - 16582296-16583042
Length = 248
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = -2
Query: 71 SPWWRRGTGTNRI--EPSSQRSC 9
SPW RRG T R+ PS SC
Sbjct: 3 SPWVRRGRATGRLTQSPSFSPSC 25
>04_01_0172 - 1954275-1954533,1954546-1954873,1955772-1956174
Length = 329
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 175 GDIADNRRGR--YTDNGGYSLG 234
GD+ADNR G T NGG +G
Sbjct: 163 GDVADNRHGEGVATGNGGTRVG 184
>03_02_0395 - 8091389-8093119,8093637-8093720,8093754-8094773
Length = 944
Score = 25.4 bits (53), Expect = 6.5
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = -3
Query: 232 RDCTRRCRYIVRVDYRRYHLRFLQDSERYTLPXXXXXXXXXXXELQYGVERLQHLPGGAE 53
RD R R V R HLR LQD R +LP +Q + + E
Sbjct: 714 RDVARLARLAPGVRARSLHLRKLQDGTR-SLPLLSAQHAAEFGGVQESIREMTIYSSDVE 772
Query: 52 E 50
E
Sbjct: 773 E 773
>03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 65 REMLKPFDPVLKFFTVKSVIFLSFWQGVALAILEKAEVI 181
RE L P +F TVK L+ W G +L + E + ++
Sbjct: 971 REWLSADFPQARFLTVKYKTNLTQWTGASLPLQEVSSML 1009
>02_03_0386 +
18404641-18404673,18406366-18406558,18406688-18406773,
18407693-18407824,18407923-18408087,18409440-18409865
Length = 344
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 166 ESGGDIADNRRGRYTDNGGYSLGRV 240
+SGGD+A N R G + +GRV
Sbjct: 190 QSGGDVAVNEEARDEQIGVFPVGRV 214
>02_02_0197 + 7689403-7691070
Length = 555
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 EAVRPRTEVLHR*ICYFPLVLARCSARYPGESG-GDIADN 192
E RPR +L + +F L+ + CSAR+ G GD+ ++
Sbjct: 2 EPSRPRLPLLLLLLLHFSLLASPCSARWRDGCGVGDLRES 41
>01_06_0193 - 27359575-27361962
Length = 795
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2
Query: 80 ASASPWWRRGTGTN 39
ASASPW GTGT+
Sbjct: 21 ASASPWQTTGTGTS 34
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 197 RRLSAISPPLSPG*RALHLARTRGK 123
RR S+ SPP P R H+A RG+
Sbjct: 77 RRSSSSSPPPPPHPRGCHVAVDRGR 101
>03_06_0746 +
35961431-35961488,35963941-35964021,35964650-35964713,
35965538-35966216
Length = 293
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 98 SVRGRTASASPWWRRGTG 45
+ R R+ WWR GTG
Sbjct: 209 AARRRSGGGERWWREGTG 226
>03_05_1044 +
29908348-29908503,29909495-29909626,29910049-29910364,
29910447-29910510,29910614-29910727,29910806-29910968,
29911166-29911316,29911403-29911986,29912313-29912542,
29912791-29913045,29913293-29913590
Length = 820
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +1
Query: 115 ICYFPLVLARCSARYPGESGGDIA--DNRRGRYTDNGGYSLGRV 240
+C + L+ RC G+S G + D+R G Y G V
Sbjct: 252 LCIWSLLFLRCGTLVSGDSSGSVQFWDSRHGTLLQAHTYHKGDV 295
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 163 GESGGDIADNRRGRYTDNGGYSLGR 237
G S D AD+R RYTD ++ GR
Sbjct: 120 GSSSDDEADHRNYRYTDPVVHTSGR 144
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 229 DCTRRCRYIVRVDYRRYHLRFLQDSERYTLP 137
+ R C Y++ ++ + L DSE Y +P
Sbjct: 408 ELARECDYVLEATNQKRYKELLSDSEGYYVP 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,666,585
Number of Sequences: 37544
Number of extensions: 120900
Number of successful extensions: 566
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 58
effective length of database: 12,615,796
effective search space used: 264931716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -