Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H23
         (240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   1.2  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    20   3.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    20   3.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    20   4.9  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    20   4.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   8.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   8.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    19   8.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   8.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 10  QLLCELGSIRFVPVPRRHQ 66
           Q  CE   I F+P+P R++
Sbjct: 767 QKKCEERGILFMPIPNRYR 785


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 144 PCQNERKITDLTVKNFSTGSNGFSIS 67
           PC +E  I++    N     NG  +S
Sbjct: 39  PCADELHISEDIATNIQAAKNGADMS 64


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 144 PCQNERKITDLTVKNFSTGSNGFSIS 67
           PC +E  I++    N     NG  +S
Sbjct: 39  PCADELHISEDIATNIQAAKNGADMS 64


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 235 GRDCTRRCRYIVRVDYRRYHLRFLQDSERYTLP 137
           GR   R  R   +  Y  YH    +DSE +  P
Sbjct: 374 GRVLMRTVRGKEKTCYYPYHPSTQEDSEEHLTP 406


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 235 GRDCTRRCRYIVRVDYRRYHLRFLQDSERYTLP 137
           GR   R  R   +  Y  YH    +DSE +  P
Sbjct: 374 GRVLMRTVRGKEKTCYYPYHPSTQEDSEEHLTP 406


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 81  GFSISLVAPRNRNKPYRAKLTEKLSS 4
           GF   L+ PR + +  R K+   LSS
Sbjct: 601 GFPERLILPRGKPEGMRYKMFFFLSS 626


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 81  GFSISLVAPRNRNKPYRAKLTEKLSS 4
           GF   L+ PR + +  R K+   LSS
Sbjct: 601 GFPERLILPRGKPEGMRYKMFFFLSS 626


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 101 TSVRGRTASASPWWRRGTGTNRIEPSSQRSCP 6
           T+ R    S    W   TGT  I  ++ ++CP
Sbjct: 129 TAYRIHADSCDRLWVLDTGTIGIGNTTIQACP 160


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 230 RLYPPLSVYRPRRLS 186
           R+YPP S+   + +S
Sbjct: 365 RMYPPASILMRKAIS 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,855
Number of Sequences: 438
Number of extensions: 1345
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)