Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H22
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein. 149 5e-37
AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender... 149 5e-37
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z79600-9|CAJ85761.1| 110|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z79600-8|CAJ85760.1| 147|Caenorhabditis elegans Hypothetical pr... 29 0.83
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 28 1.4
AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical ... 28 1.9
Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical pr... 27 4.4
U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z78410-5|CAD44102.1| 238|Caenorhabditis elegans Hypothetical pr... 26 7.7
>X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein.
Length = 113
Score = 149 bits (361), Expect = 5e-37
Identities = 65/98 (66%), Positives = 81/98 (82%)
Frame = +2
Query: 2 HEAKTTKKLKIIDAYLLYVFLTAVIQFAYCCLVGTFPFNSFLSGFISTVSSFVLGVCLRL 181
++ T+ KLKIIDAY+ Y+ T + QF YC LVGTFPFNSFLSGFISTV+SFVL CLR+
Sbjct: 16 YQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFISTVTSFVLASCLRM 75
Query: 182 QVNPENKTEFQGLSAERGFADFIFAHLVLHIVVINFIG 295
QVN EN++EF +S ER FADFIFA+L+LH+VV+NF+G
Sbjct: 76 QVNQENRSEFTAVSTERAFADFIFANLILHLVVVNFLG 113
>AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender
against apoptoticdeath) homolog protein 1 protein.
Length = 113
Score = 149 bits (361), Expect = 5e-37
Identities = 65/98 (66%), Positives = 81/98 (82%)
Frame = +2
Query: 2 HEAKTTKKLKIIDAYLLYVFLTAVIQFAYCCLVGTFPFNSFLSGFISTVSSFVLGVCLRL 181
++ T+ KLKIIDAY+ Y+ T + QF YC LVGTFPFNSFLSGFISTV+SFVL CLR+
Sbjct: 16 YQKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFISTVTSFVLASCLRM 75
Query: 182 QVNPENKTEFQGLSAERGFADFIFAHLVLHIVVINFIG 295
QVN EN++EF +S ER FADFIFA+L+LH+VV+NF+G
Sbjct: 76 QVNQENRSEFTAVSTERAFADFIFANLILHLVVVNFLG 113
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 47 LLYVFLTAVIQFAYCCLVGTFPFNSFLSGFISTVSSFV 160
LL VF+ + LV TF FN FLS +STV FV
Sbjct: 8 LLSVFIFLLFSSEVEALVTTFHFNGFLSCGLSTVDFFV 45
>Z79600-9|CAJ85761.1| 110|Caenorhabditis elegans Hypothetical
protein F59C6.14b protein.
Length = 110
Score = 29.1 bits (62), Expect = 0.83
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 20 KKLKIIDAYLLYVFLTAVIQFAYCCLVGTFPFNSFLSGFIS 142
K + IDA + +T ++ AYC G F +L GF+S
Sbjct: 70 KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 109
>Z79600-8|CAJ85760.1| 147|Caenorhabditis elegans Hypothetical
protein F59C6.14a protein.
Length = 147
Score = 29.1 bits (62), Expect = 0.83
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 20 KKLKIIDAYLLYVFLTAVIQFAYCCLVGTFPFNSFLSGFIS 142
K + IDA + +T ++ AYC G F +L GF+S
Sbjct: 107 KMIVFIDA-VFSAIITLMLLIAYCFFAGGFNGKQYLDGFVS 146
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 71 VIQFAYCCLVGTFPFNSFLSGFISTVSSFVLGVCLRLQVNPENK 202
+IQ + ++G F F + FI ++ F+LG CL ++ P +K
Sbjct: 12 LIQKSEYFIIGVFLI--FRTAFIFIITGFILGYCLHVKDPPSDK 53
>AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical
protein F18A12.6 protein.
Length = 649
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 160 NK*TDSRNKTTQKRVEGKCADKATISELN 74
NK + S+++ T K+V KC + IS+LN
Sbjct: 140 NKTSTSKSENTMKQVYAKCRELQKISDLN 168
>Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical
protein ZK632.5 protein.
Length = 824
Score = 26.6 bits (56), Expect = 4.4
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 LPTLCVFNRRNSVRLLLPCRHIS-LQLFFEWFYFYCQFICSRSMPETSSEPGEQD*VPRV 219
L + V NS+RL++ I Q+FFE+F ++I S + + + +P++
Sbjct: 268 LKNIFVTGTDNSIRLMMQKYLIDEQQIFFEYF----EYIFDESASTSYNFQSIVENLPKL 323
Query: 220 EC*ARLCRFHIC 255
CRF IC
Sbjct: 324 NIHDASCRFQIC 335
>U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical
protein F58F12.4 protein.
Length = 150
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 86 YCCLVGTFPFNSFLSGFISTVSSFVLGVCLRLQVNPENKTE 208
YCC SFL+ I +S F++G C+R + + KT+
Sbjct: 102 YCCEHIQTWLLSFLAVIIVFLSIFLIGCCVRCCCSYKRKTQ 142
>Z78410-5|CAD44102.1| 238|Caenorhabditis elegans Hypothetical
protein C51E3.9 protein.
Length = 238
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = -1
Query: 213 WNSVLFSGFT*SLRHTPRTNELTV 142
W ++L+SG ++++TP+ +E T+
Sbjct: 191 WENILYSGCFPAVKNTPKCDERTI 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,396,163
Number of Sequences: 27780
Number of extensions: 118867
Number of successful extensions: 348
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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