Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H21
(541 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 232 2e-62
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 232 3e-62
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 188 6e-49
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 146 1e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 127 9e-31
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.027
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.036
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 32 0.062
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.14
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 31 0.14
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 29 0.58
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 29 0.58
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.58
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 0.77
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 28 1.0
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 1.8
SPBC19F8.02 |||nuclear distribution protein NUDC |Schizosaccharo... 27 1.8
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 27 1.8
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.8
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 27 1.8
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 2.3
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 3.1
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 26 3.1
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 5.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 5.4
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 25 5.4
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 25 5.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 5.4
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 25 7.2
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 7.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 25 7.2
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 7.2
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.5
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 9.5
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 9.5
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 25 9.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 9.5
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 9.5
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 25 9.5
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 232 bits (568), Expect = 2e-62
Identities = 110/164 (67%), Positives = 130/164 (79%)
Frame = +1
Query: 31 GRCMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 210
G MT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPP
Sbjct: 405 GGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPP 464
Query: 211 APRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 390
APRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+
Sbjct: 465 APRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYK 524
Query: 391 TEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQII 522
ED+ + IQ+KN LESY ++++++++D LKDK+ SDK+ I
Sbjct: 525 AEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAI 568
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 232 bits (567), Expect = 3e-62
Identities = 110/164 (67%), Positives = 129/164 (78%)
Frame = +1
Query: 31 GRCMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 210
G MT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPP
Sbjct: 405 GGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPP 464
Query: 211 APRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 390
APRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+
Sbjct: 465 APRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYK 524
Query: 391 TEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQII 522
ED+ + IQ+KN LESY ++++++++D LKDK+ SDK+ +
Sbjct: 525 AEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETV 568
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 188 bits (457), Expect = 6e-49
Identities = 93/172 (54%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Frame = +1
Query: 31 GRCMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 210
G MT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L GIPP
Sbjct: 434 GGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPP 493
Query: 211 APRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKY 387
APRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV EAE++
Sbjct: 494 APRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEF 553
Query: 388 RTEDDKQKDTIQSKNALESYCFNMKSTM-EDEKLKDKITDSDKQIIMDKCND 540
ED K+ I+++N LE+Y +++K +DE+L K+ DKQ ++D D
Sbjct: 554 AEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVED 605
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 146 bits (355), Expect = 1e-36
Identities = 74/170 (43%), Positives = 105/170 (61%)
Frame = +1
Query: 31 GRCMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 210
G T LI RN +D Q V I+VF+GER + +DN L+G F+LTGI P
Sbjct: 448 GGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAP 507
Query: 211 APRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 390
AP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR
Sbjct: 508 APKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYR 566
Query: 391 TEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCND 540
D +K+ I++ N ES C +++S ++ KDK+ + + K D
Sbjct: 567 ASDMARKEAIENGNRAESVCTDIESNLDIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 127 bits (307), Expect = 9e-31
Identities = 61/164 (37%), Positives = 94/164 (57%)
Frame = +1
Query: 31 GRCMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPP 210
G + RN +DNQ V V++GER +N LG+F+LTGIPP
Sbjct: 410 GNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPP 469
Query: 211 APRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 390
PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++
Sbjct: 470 MPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFK 529
Query: 391 TEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQII 522
+D +++K+ LESY N+++T+ + + K+ DK I
Sbjct: 530 QQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKI 573
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.1 bits (72), Expect = 0.027
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 301 KENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMEDE 480
KE+++ +ND L E+IE + ++ + +TE + SK +L Y N+K DE
Sbjct: 678 KESELVKSNDNKLLLNEQIESLNDQLSQLKTE---MESVTTSKESLADYLSNLKERHNDE 734
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.036
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 289 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQ-KDTIQSKNALESYCFNMKS 465
K K ++++ + RL E +E+ EAE DK +T+ KNALE Y ++ ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 466 TMED 477
++D
Sbjct: 593 KLDD 596
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.9 bits (69), Expect = 0.062
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 253 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQK--DTIQS 426
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 427 KNA 435
+A
Sbjct: 118 LDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 30.7 bits (66), Expect = 0.14
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 298 NKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMED 477
NK+ K T D SKEE+E +V E E D +Q D K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 478 EKLKDKITD 504
KLK K ++
Sbjct: 580 RKLKKKASN 588
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 30.7 bits (66), Expect = 0.14
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3
Query: 263 PLASMSKVTSIWGTPRGAGGIPVSSNLPRRLLSLVMARSPS 141
PLA MS TSI G G GG P + RR + + +SPS
Sbjct: 81 PLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.58
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 268 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTED 399
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 270 KNSVSVDVKGDFDLGHASGRGWDTGQFELAEEVVILGHGALTL 142
K S + V + + G+ + WD G+F L + I GH +L
Sbjct: 40 KKSKRLYVANEIEEGYVAVFEWDNGKFSLVDRFTIDGHSPTSL 82
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.58
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Frame = +1
Query: 223 VPQIEVTFDIDANGILNVSAIEKSTN-----KENKITITNDK-----GRLSKEEIERMVN 372
+ ++ +F + N + +I K+ N KE + ++ D+ GR + + N
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEERFEKEKRRIMSEDRDKLIRGRQKTSIVAKYRN 1272
Query: 373 EAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCND 540
+ E DDKQ + KN+LE+ M+ + E K D ++ +DK D
Sbjct: 1273 KRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMED 1327
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 0.77
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 343 SKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQI 519
+KEE+E +NE + E ++Q S+N ++ +K +E EKLK+ + D ++
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDVKL 1663
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.9 bits (59), Expect = 1.0
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = -2
Query: 504 VSNLVLKLLIFHGGLHVEAVRLESILRLNSVLLFVIF 394
++++V +L+ G + + + + ++++ NSVLLF ++
Sbjct: 121 INSIVPVILVREGSILINLLHIRALIKANSVLLFDVY 157
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/61 (21%), Positives = 32/61 (52%)
Frame = +1
Query: 349 EEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMD 528
EE++ +NEA+K E ++ I+ +L+ +++ +++ + S KQ +++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 529 K 531
K
Sbjct: 79 K 79
>SPBC19F8.02 |||nuclear distribution protein NUDC
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 325 NDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQS 426
+D ++ +E+M+ E + RT++ K+KD +Q+
Sbjct: 116 SDLDEETRATVEKMMLEQSQKRTDEQKRKDVLQN 149
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +1
Query: 268 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE-AEKYRTEDDKQKDTIQSKN--AL 438
LNV +K N+IT T D S++E + N + + D KD +
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGF 69
Query: 439 ESYCFNMKSTMEDEKLKDKITDSDKQ 516
+ + +MKS ++ ++ D++
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRR 95
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = +1
Query: 280 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALES 444
AIE+ N+E ++ + ++ R EEI+ ++ T +++ ++S +E+
Sbjct: 520 AIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEA 574
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 293 DFSMADTLRIPLASMSKVTSIWGTPRGAGGIPVSSNLPRRLLSLVMARSPS 141
DFS++ + + L + S S +P + +SS +PR +S + R S
Sbjct: 417 DFSLSQVMPLDLIAPSMQPSAVSSPMSESHVQISSEMPRTGMSALPMRPRS 467
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 331 KGRLSKEEIERMVNEAEK 384
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 367 VNEAEKYRTEDDKQKDTIQSKNALESYCFN 456
+NE + Y + Q DT S L S C N
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVN 859
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 3.1
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +1
Query: 283 IEKSTNK---ENKI--TITNDKGRLSKEE--IERMVNEAEKYRTEDDKQKDTIQSKNALE 441
+EK T + EN + I N L KE + M+NEA + ++D Q+D ++ E
Sbjct: 1 MEKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEKLEDAE 60
Query: 442 SYCFNMKS 465
+ F+ S
Sbjct: 61 LFMFDTGS 68
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 223 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 384
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 293 DFSMADTLRIPLASMSKVTSIWGTPRGAGGIPVSSNLPRRLLSLVMARSPSNTWMSTPGW 114
+ S + L IP+AS K S T G G S + P L++ + R+ S +
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNSFRETESPKPF 538
Query: 113 LS 108
LS
Sbjct: 539 LS 540
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = +1
Query: 286 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKS 465
E N++ + ND+ E +++ + E Y+T + Q + L +KS
Sbjct: 32 ELKLNEKGGVLKENDEHLECSESFKKLAEKEEAYQTLKNSYNSLKQQHSNLLGKVSGIKS 91
Query: 466 TMEDEKLKD 492
T+ + KD
Sbjct: 92 TLGERLKKD 100
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 292 STNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALES 444
+TNK N + N L EEI V + E + DD+ + I++ AL+S
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELR-VIENFKALDS 95
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 343 SKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYC 450
S+ E +++ E ++ ED+KQ + + K AL+ +C
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC 334
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 323 VMVILFSLLVDFSMADTLRIPLASM 249
V+ F L + F+ TLR+P+AS+
Sbjct: 77 VVTYCFVLFLQFAEQSTLRVPMASL 101
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 259 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 354
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +1
Query: 274 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNA 435
V A+ KS +++ ++ G + EEI ++++ E E+D++ + N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -3
Query: 221 PRGAGGIPVSSNLPRRLLSLVMARSPSNTW 132
P G P++S + + +L + + P+N W
Sbjct: 345 PEGQEAGPITSEISKWILDIQYGKEPNNPW 374
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -2
Query: 456 VEAVRLESILRLNSVLLFVIFSPVLLGLIDHTFNLFLRET 337
++ + L+ LR N VLL ++F +L+G++ H + L+ +
Sbjct: 1 MQKLLLDPALR-NWVLLPIMFVMILIGILRHNATILLQSS 39
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 234 DLGHASGRGWDTGQFELAEEVVILGHG--ALTLEHLD 130
+L HAS D +LA+++ + HG A T E+LD
Sbjct: 892 ELTHASKPSLDEKTMQLAKQIAVSFHGYEAPTRENLD 928
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +1
Query: 313 ITITNDKGRLSKEEIERMVNEAEKYRTEDDKQKDTIQSKNALESYCFNMKSTMEDEKLKD 492
I +T + R S E V + E ++D +S+NA + S + + +K+
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 493 KITDSDKQIIMDK 531
K + +K + DK
Sbjct: 298 KQSKIEKYMKSDK 310
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 244 FDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE 381
FD D NG + V E+ T+ +T+ RLS+EE+ M+ EA+
Sbjct: 94 FDKDGNGYITV---EELTH-----VLTSLGERLSQEEVADMIREAD 131
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 24.6 bits (51), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 247 DIDANGILNVSAIEKSTNKENKIT----ITNDKGRLSKEEIE 360
D+D VS IEK+T + +T N G+L K EIE
Sbjct: 1209 DLDTEASPVVSTIEKTTKGDVSVTEEQQSANIDGQLEKPEIE 1250
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 24.6 bits (51), Expect = 9.5
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = +1
Query: 328 DKGRLSKEEIERMVNEAEKYR-TEDDKQKDTIQSKNALESYCFNMKST-----------M 471
+ G K+ +R V +EK EDD +QSKN N +++ +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 472 ED-EKLKDKITDSDKQIIMDKCND 540
E+ EK+++K+T+ DK + D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 332 LSLVMVILFSLLVDFSMADTLRI 264
L L++VILF+ L +FS +D+ +
Sbjct: 269 LPLIVVILFAFLSNFSWSDSTSV 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,901,321
Number of Sequences: 5004
Number of extensions: 33064
Number of successful extensions: 150
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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