Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H19
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    43   1e-06
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    38   4e-05
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    29   0.017
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   3.5  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   3.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   8.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   8.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   8.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   8.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.1  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 42.7 bits (96), Expect = 1e-06
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
 Frame = +2

Query: 35  LPKDTTVLISVGDINLDPKLWEDPLEVKPERFIDENGLLKNTEHLYHFGMGYRRCLGDSL 214
           +PK+  + I    I+ D  ++ +P    PERF  +    ++  H   FG G R C+G   
Sbjct: 390 IPKEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARF 449

Query: 215 AKSFIFITFVGIMQKFRVNCCNGVLPSSEPDIG-LIATPK 331
           A     +  + I++  +V  C   +   E D G  + +PK
Sbjct: 450 AVYQTKVGLITILRNHKVEVCEKTIIPYEFDPGAFLLSPK 489



 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 296 SEPDIGLIATPKPF 337
           +EP +GL AT  PF
Sbjct: 69  NEPMVGLYATRSPF 82


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 37.9 bits (84), Expect = 4e-05
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = +2

Query: 29  YFLPKDTTVLISVGDINLDPKLWEDPLEVKPERFIDENGLLKNTEHLYHFGMGYRRCLGD 208
           Y +P   TV+I    ++  P ++ +P    P+ F+ E    ++      F  G R C+G 
Sbjct: 432 YTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGR 491

Query: 209 SLAKSFIFITFVGIMQKFRV 268
             A   + I    I++ FRV
Sbjct: 492 KYAMLKLKIVLSTILRNFRV 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 0.017
 Identities = 21/88 (23%), Positives = 38/88 (43%)
 Frame = +2

Query: 5   EEDTEIDGYFLPKDTTVLISVGDINLDPKLWEDPLEVKPERFIDENGLLKNTEHLYHFGM 184
           +E  E+ GY L   T VL+      L+ + ++D  +  PER+        +   +  FG 
Sbjct: 403 DEPIELSGYRLTAGTVVLLHTWIAGLNEENFKDAKKYLPERWTTPT-TPHSPLLVAPFGA 461

Query: 185 GYRRCLGDSLAKSFIFITFVGIMQKFRV 268
           G R C G       + +    I+++F +
Sbjct: 462 GRRICPGKRFVDLALQLILAKIIREFEI 489


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 147 SPFSSINLSGLTSRGSSHNFGSKFISPTDINTVVS 43
           S    +NLS         NFG   +SP  ++ +VS
Sbjct: 365 SSIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVS 399


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 279 LQQFTLNFCMIPTNVIN 229
           +  F + FCM P  VIN
Sbjct: 96  ISNFLMMFCMSPPMVIN 112


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 279 LQQFTLNFCMIPTNVIN 229
           +  F + FCM P  VIN
Sbjct: 62  ISDFLMMFCMSPPMVIN 78


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 129 NLSGLTSRGSSHNFGSKFISPTDINTVVSFGRKY 28
           N  G + + SSH+ GSK  +  D++  +   R +
Sbjct: 393 NSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNH 426


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 233 ITFVGIMQKFRVNCCNGVLPSSEPDIGLIA 322
           + F  ++ +  V C N +LP S  +  ++A
Sbjct: 327 LQFFNLIDQNAVGCWNSLLPYSPENQAVVA 356


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 132 INLSGLTSRGSSHNFGSKFISPTDI 58
           +N+ G    GSS +  +KF    DI
Sbjct: 361 LNMLGNVIEGSSDSINTKFYGMYDI 385


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 WATGVVLVTLWRSHSYL*RSLE 248
           W T  V+V+ +  +SYL   LE
Sbjct: 283 WRTPSVVVSDYSDYSYLDEKLE 304


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 20  IDGYFLPKDTTVLISVGD 73
           IDG FLPK    L+   D
Sbjct: 351 IDGIFLPKHPLDLLREAD 368


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/30 (23%), Positives = 14/30 (46%)
 Frame = +2

Query: 233 ITFVGIMQKFRVNCCNGVLPSSEPDIGLIA 322
           + F G+M    + C N   P    ++ ++A
Sbjct: 317 VLFFGLMNNSAIGCWNEHQPLQRENMDMVA 346


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 20  IDGYFLPKDTTVLISVGD 73
           IDG FLPK    L+   D
Sbjct: 351 IDGIFLPKHPLDLLREAD 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,525
Number of Sequences: 438
Number of extensions: 2211
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)