Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H18
(365 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0972 - 8176013-8176960 50 6e-07
03_06_0560 + 34726338-34727243 50 6e-07
02_01_0283 + 1903869-1904786 49 1e-06
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 36 0.010
09_02_0319 + 7217262-7217372,7218026-7218121,7218642-7218771,721... 36 0.013
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 34 0.039
01_01_0166 + 1412918-1413309,1413845-1414006,1414534-1414720,141... 34 0.039
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 33 0.052
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 33 0.069
02_02_0016 - 6118739-6118758,6119116-6119236,6119478-6119613,611... 33 0.069
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 33 0.091
01_05_0731 - 24700036-24700173,24700354-24700480,24701245-247013... 32 0.12
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 31 0.28
01_01_0399 + 3036716-3037576 31 0.28
03_05_1114 - 30500518-30500913,30501312-30501372,30501455-305015... 30 0.48
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 30 0.48
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 30 0.48
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 30 0.64
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 30 0.64
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 30 0.64
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 30 0.64
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 30 0.64
08_01_0410 + 3661304-3661383,3661494-3661673,3661757-3661870,366... 29 0.85
01_01_0590 + 4396958-4397155,4397246-4397335,4397445-4397583,439... 29 0.85
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 29 1.5
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 29 1.5
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 28 2.0
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 28 2.0
06_03_0967 - 26395537-26396590,26400918-26401111 27 3.4
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 27 3.4
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 3.4
10_05_0076 + 8872765-8872932,8874727-8874822,8875843-8875955,887... 27 4.5
09_03_0044 - 11855569-11855664,11855775-11855891,11856572-118566... 27 4.5
06_03_0823 - 25026949-25027551,25027635-25027742,25027994-250281... 27 4.5
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 27 4.5
03_05_0700 + 26920743-26920771,26920880-26920991,26921205-269213... 27 4.5
02_02_0602 + 12053929-12054081,12054241-12054498,12054611-120547... 27 4.5
01_06_1405 + 37070395-37070484,37070599-37070700,37071403-370714... 27 4.5
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 27 6.0
11_01_0204 - 1612505-1612636,1612809-1612926,1613050-1613162,161... 27 6.0
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 27 6.0
06_03_0545 + 21983666-21986086 27 6.0
02_01_0109 - 795066-796280 27 6.0
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 27 6.0
10_06_0006 - 9496990-9497592,9497695-9497802,9497884-9497997,949... 26 7.9
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 26 7.9
09_02_0030 + 3115502-3115750,3115835-3116104,3116193-3116633,311... 26 7.9
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 26 7.9
06_03_0548 + 22004338-22006746 26 7.9
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 26 7.9
04_04_1272 - 32288142-32288456,32288538-32288670,32288780-322890... 26 7.9
03_03_0181 + 15162681-15162806,15164026-15164172,15164269-151643... 26 7.9
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 26 7.9
>07_01_0972 - 8176013-8176960
Length = 315
Score = 50.0 bits (114), Expect = 6e-07
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 236 GSVWKVTWAHPEFGQVIATCSFDRTAAIWEE 328
G VW+V WAHP++G ++A+CS+D IW+E
Sbjct: 58 GPVWRVAWAHPKYGTILASCSYDGRVIIWKE 88
Score = 48.0 bits (109), Expect = 2e-06
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 73 AQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKV 177
++ I DHKD++HD A D+YG+R+AT SSD VK+
Sbjct: 3 SKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKI 37
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 82 IFADHKDLIHDVAYDFY--GERMATCSSDQYVKVWDSDGHGGWRLTTSWKAH 231
+F DHK ++ +A+ Y G +A SSD + V GGW +AH
Sbjct: 99 VFTDHKSSVNSIAWAPYEVGLCLACGSSDGTISVMTMRADGGWDTARIERAH 150
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 118 AYDFYGERMATCSSDQYVKVWDSDGHGGW 204
A+ YG +A+CS D V +W G W
Sbjct: 66 AHPKYGTILASCSYDGRVIIWKEGAGGHW 94
>03_06_0560 + 34726338-34727243
Length = 301
Score = 50.0 bits (114), Expect = 6e-07
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 236 GSVWKVTWAHPEFGQVIATCSFDRTAAIWEE 328
G VW+V WAHP+FG ++A+C +D +W+E
Sbjct: 58 GPVWRVAWAHPKFGSILASCGYDGRVVVWKE 88
Score = 43.6 bits (98), Expect = 5e-05
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 91 DHKDLIHDVAYDFYGERMATCSSDQYVKV 177
DHKD++HD A D+YG+ +AT SSD V++
Sbjct: 9 DHKDMVHDSAIDYYGKSLATASSDSTVQI 37
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 82 IFADHKDLIHDVAYDFY--GERMATCSSDQYVKVWDSDGHGGWRLTTSWKAH 231
+F +HK ++ +A+ Y G +A SSD + V GGW TT +AH
Sbjct: 99 VFDNHKSSLNSIAWAPYELGLCLACGSSDGSISVMTMRPDGGWDSTTIEQAH 150
>02_01_0283 + 1903869-1904786
Length = 305
Score = 49.2 bits (112), Expect = 1e-06
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 236 GSVWKVTWAHPEFGQVIATCSFDRTAAIWEE 328
G VW+V WAHP++G ++A+CS+D IW+E
Sbjct: 56 GPVWQVAWAHPKYGSLLASCSYDGRVIIWKE 86
Score = 47.2 bits (107), Expect = 4e-06
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTT 216
H+D++HD+A D+YG+R+AT SSD +K+ G+ +L T
Sbjct: 10 HQDVVHDIAMDYYGKRIATASSDNTIKIIGVSGNSHQQLAT 50
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 85 FADHKDLIHDVAYDFY--GERMATCSSDQYVKVWDSDGHGGWRLTTSWKAH 231
F +HK ++ +A+ + G +A SSD + V+ + GGW T +AH
Sbjct: 99 FIEHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGGWDTTRIDQAH 149
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 35.9 bits (79), Expect = 0.010
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 76 QTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHG 198
+++ +H LI DV + R+AT S D+ V+VWD+D G
Sbjct: 642 KSVLEEHSLLITDVRFSPSIPRLATSSFDKTVRVWDADNQG 682
>09_02_0319 +
7217262-7217372,7218026-7218121,7218642-7218771,
7219137-7219225,7219764-7219832,7220229-7220286,
7220374-7220489
Length = 222
Score = 35.5 bits (78), Expect = 0.013
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHG 198
HK +H VA++ G ++A+ S D +VW D HG
Sbjct: 34 HKKKVHSVAWNCLGMKLASGSIDHTARVWSIDPHG 68
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 33.9 bits (74), Expect = 0.039
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 106 IHDVAYDFYGERMATCSSDQYVKVWDSD 189
I+ ++YD G R+ TC +D+ +K+W D
Sbjct: 451 IYALSYDVSGSRLVTCEADKTIKMWKED 478
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 82 IFADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
+ + H + +A+D E T S+D+ +K+WD
Sbjct: 179 VISGHLGWVRSIAFDPSNEWFCTGSADRTIKIWD 212
>01_01_0166 +
1412918-1413309,1413845-1414006,1414534-1414720,
1415221-1415646,1416028-1416036,1416361-1416768,
1417397-1417654
Length = 613
Score = 33.9 bits (74), Expect = 0.039
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 221 GKHTSGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTT 343
G HT GS++ V+W+ P+ QV+ T S D+TA +W+ + D +
Sbjct: 230 GSHT-GSIYAVSWS-PDSKQVL-TVSADKTAKVWDILEDAS 267
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 33.5 bits (73), Expect = 0.052
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 91 DHKDLIHDVAYDFYGERMATCSSDQYVKVWDSD 189
+H LI DV + R+AT S D+ V+VWD+D
Sbjct: 645 EHSALITDVRFSPSMSRLATSSFDKTVRVWDAD 677
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 33.1 bits (72), Expect = 0.069
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 61 NLFEAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTTSWKAHQRF 240
N + +F H D I VA + + S D +K+WD D GW T ++ H +
Sbjct: 100 NTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD--KGWMCTQIFEGHSHY 157
Query: 241 CLE 249
++
Sbjct: 158 VMQ 160
>02_02_0016 -
6118739-6118758,6119116-6119236,6119478-6119613,
6119887-6119993,6120316-6120409,6120509-6120705,
6121872-6121943,6122597-6122773,6122862-6122936,
6123027-6123167,6123837-6124025,6124415-6124480,
6124564-6124714,6125040-6125200,6126279-6126410,
6126508-6126833,6126906-6126942,6127056-6127088,
6127500-6127554,6127666-6127753,6127817-6127862
Length = 807
Score = 33.1 bits (72), Expect = 0.069
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 61 NLFEAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTTSWKAHQRF 240
N + +F H D I VA + + S D +K+WD D GW T ++ H +
Sbjct: 114 NTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD--KGWMCTQIFEGHSHY 171
Query: 241 CLE 249
++
Sbjct: 172 VMQ 174
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 32.7 bits (71), Expect = 0.091
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 61 NLFEAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTTSWKAHQRF 240
N + +F H D I VA + + S D +K+WD D GW T ++ H +
Sbjct: 82 NTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWD--KGWMCTQIFEGHSHY 139
Query: 241 CLE 249
++
Sbjct: 140 VMQ 142
>01_05_0731 -
24700036-24700173,24700354-24700480,24701245-24701357,
24702116-24702271,24702439-24702516,24704102-24704203,
24704325-24704393,24704743-24704892
Length = 310
Score = 32.3 bits (70), Expect = 0.12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 239 SVWKVTWAHPEFGQVIATCSFDRTAAIWEEV 331
++ + W P++G IA D T ++WEEV
Sbjct: 78 AILNIVWLPPDYGDAIACVCADGTLSLWEEV 108
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 70 EAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGW 204
E + + H + + +D G +A+ D VK+W ++ +G W
Sbjct: 254 ENVAVLSGHDGEVLQLEWDMGGMTLASTGGDGMVKLWQANLNGVW 298
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 31.1 bits (67), Expect = 0.28
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 67 FEAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
FE H++ + V++ G +ATCS D+ V +W+
Sbjct: 106 FECVATLEGHENEVKSVSWSASGSLLATCSRDKSVWIWE 144
Score = 30.3 bits (65), Expect = 0.48
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 275 GQVIATCSFDRTAAIWEEVG 334
G+++AT SFD T AIWE G
Sbjct: 84 GKLLATASFDSTTAIWEYSG 103
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2
Query: 227 HTSGSVWKVTWAHPE----FGQVIATCSFDRTAAIWEEVGD 337
HT VW + W +P G V+A+C D+ IW+ D
Sbjct: 20 HTD-RVWSLAW-NPSPGAGAGPVLASCGGDKAVRIWKRAAD 58
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 133 GERMATCSSDQYVKVWDSDGHGGWR 207
G +A+C D+ V++W G W+
Sbjct: 38 GPVLASCGGDKAVRIWKRAADGAWQ 62
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 242 VWKVTWAHPEFGQVIATCSFDRTAAIWE 325
V V+W+ G ++ATCS D++ IWE
Sbjct: 119 VKSVSWSAS--GSLLATCSRDKSVWIWE 144
>01_01_0399 + 3036716-3037576
Length = 286
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 195 MAIGIPYLDILVARTSGHPFSVEVVCNIVDKI 100
MA+ +P L ++VA + G S+E+ CN++D I
Sbjct: 1 MALMVPELLLVVATSEGALASIELACNLLDSI 32
>03_05_1114 -
30500518-30500913,30501312-30501372,30501455-30501558,
30501680-30501739,30502419-30502599,30502873-30503037,
30503395-30503531
Length = 367
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTTSWK 225
H D I +++ G A+ D+ VKVW +D R TS K
Sbjct: 62 HSDAIRAISFSANGALFASAGDDKLVKVWKTDSWCCIRTITSEK 105
>02_05_1074 - 33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 91 DHKDLIHDVAYDFYGERMATCSSDQYVKVWDS-----DGHGGWRLTTSWKAHQRFCLESH 255
+H+ ++D+A T S D VK+WD+ D RLT S + + C
Sbjct: 1080 EHRLSVNDIAVSTDNTFFVTASDDSSVKIWDTRKLEKDIAFRSRLTYSLGSSRALCTTML 1139
Query: 256 MGTPRV 273
GTP+V
Sbjct: 1140 HGTPQV 1145
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 85 FADHKDLIHDVAYDFYGERMATCSSDQYVKVWDS 186
F H ++ + G R+ T SSD VKVWD+
Sbjct: 349 FRGHNSYVNCAIFSTDGSRVITASSDCTVKVWDT 382
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 34 FAMGELTATNLFEAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVW 180
+ G+L ++A F H D + V + E +A+ S D +KVW
Sbjct: 247 YISGKLKKDLQYQADESFMMHDDAVLSVDFSRDSEMLASGSQDGKIKVW 295
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSD 189
H D + D+A+ Y + + + S D+ V++WD++
Sbjct: 531 HLDDVLDLAWSMYSQLLLSSSMDKTVRLWDTE 562
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSDG 192
H + DVA+ + +AT S+D+ K+W +DG
Sbjct: 272 HTERATDVAFSPVDDCLATASADKTAKLWKTDG 304
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
H ++ V++ G A+C D Y +VWD
Sbjct: 355 HSRSVYGVSFHPDGSLAASCGLDAYARVWD 384
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWDSDG 192
H + DVA+ + +AT S+D+ K+W +DG
Sbjct: 272 HTERATDVAFSPVDDCLATASADKTAKLWKTDG 304
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
H ++ V++ G A+C D Y +VWD
Sbjct: 355 HSRSVYGVSFHPDGSLAASCGLDAYARVWD 384
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 236 GSVWKVTWAHPEFGQVIATCSFDRTAAIWE 325
G V + +AHP I TC D+T +WE
Sbjct: 458 GGVNDIAFAHPNKQLCIITCGDDKTIKVWE 487
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 29.9 bits (64), Expect = 0.64
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMA--TCSSDQYVKVWDSDG 192
H ++D+A+ +++ TC D+ +KVWD G
Sbjct: 428 HSGAVNDIAFSRPNKQLCVVTCGDDRLIKVWDMHG 462
>08_01_0410 +
3661304-3661383,3661494-3661673,3661757-3661870,
3661975-3662133,3662193-3662243,3662838-3663018,
3663102-3663228,3663322-3663431,3663529-3663667,
3663767-3663876,3664002-3664071,3664247-3664320,
3664458-3664553,3664682-3664777,3665041-3665168,
3665422-3665656,3665743-3665910,3666274-3666381,
3666468-3666617,3666905-3667015,3667118-3667297,
3667427-3667555,3667819-3667914,3668108-3668293,
3668431-3668603,3668720-3668921
Length = 1150
Score = 29.5 bits (63), Expect = 0.85
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 FGTRII*IYPFFAMGELTATNLFEAQTIFADHKDLIHDVAYDFYGERMA--TCSSDQYVK 174
F I+ Y F GEL +A H ++D+A+ + ++ TC D+ +K
Sbjct: 444 FSKHIVQTYAFVLNGELRQQAEIDA------HIGGVNDIAFSHPNKTLSIITCGDDKLIK 497
Query: 175 VWDS 186
VWD+
Sbjct: 498 VWDA 501
>01_01_0590 +
4396958-4397155,4397246-4397335,4397445-4397583,
4398125-4398243,4398492-4398559,4399409-4399457,
4399713-4400732
Length = 560
Score = 29.5 bits (63), Expect = 0.85
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 94 HKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
H + +A+D G MAT D+ VK+WD
Sbjct: 306 HSGPVTAIAFDRGGHLMATAGVDRKVKIWD 335
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = -2
Query: 343 CSITNFLPDGSCTVKRTSCNDLTKLWVCPCDFPNRTAGVLSN*LLVSILHGHRNPIP 173
C I SC + +T+ W CP F + L N L I G+R +P
Sbjct: 1433 CMICQARYHSSCVEPLPASTQVTREWTCPFCFHLESGDPLQNRLQEKISKGNRPALP 1489
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 28.7 bits (61), Expect = 1.5
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 133 GERMATCSSDQYVKVWDSD 189
G+++ +CS D+ ++VWD D
Sbjct: 32 GKKLVSCSKDKLIRVWDLD 50
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 43 GELTATNLFEAQTI--FADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGHGGWRLTT 216
G + ++ EA+ + F H+ + + +GE A+ SSD +K+WD G
Sbjct: 86 GTIKIWDVDEAKVVRTFTGHRSSCASLDFHPFGEFFASGSSDTNMKIWDMRKKG---CIH 142
Query: 217 SWKAHQR 237
++K H R
Sbjct: 143 TYKGHTR 149
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 GELTATNLFEAQTI--FADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
G + +L EA+ + H+ V + +GE A+ SSD +K+WD
Sbjct: 178 GSIKLWDLEEAKVVRSLTGHRSSCTSVEFHPFGEFFASGSSDTDLKIWD 226
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 82 IFADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
+ HK+ + D+ + G ++ + S D+ V+VWD
Sbjct: 163 VLRGHKNAVLDLQWTTDGTQIISASPDKTVRVWD 196
>01_05_0309 - 20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 106 IHDVAYDFYGERMATCSSDQYVKVW 180
I V +D+YG+R AT + D V W
Sbjct: 1842 ISAVQFDYYGQRFATAALDGTVCTW 1866
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 QWGNLRQPTYLRLKP-YSLITKILSTMLH 121
++GNLRQP Y LK +S++ + T++H
Sbjct: 326 EYGNLRQPKYGHLKELHSVLKSMEKTLVH 354
>10_05_0076 +
8872765-8872932,8874727-8874822,8875843-8875955,
8876078-8876144,8876246-8876338,8876496-8876648,
8876761-8876849,8876976-8877081,8877178-8877265,
8877375-8877493,8877626-8877787,8877917-8878113,
8878229-8878317,8878409-8878518,8878622-8878735,
8878990-8879097,8879182-8879784
Length = 824
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 QWGNLRQPTYLRLKP-YSLITKILSTMLH 121
++GNLRQP Y LK +S+I I ++H
Sbjct: 323 EYGNLRQPKYGHLKDLHSVIKSIEKILVH 351
>09_03_0044 -
11855569-11855664,11855775-11855891,11856572-11856682,
11856768-11856874,11857182-11857221,11857328-11857408,
11857578-11857631,11857800-11857860,11857984-11858029,
11858276-11858352,11858448-11858563,11858654-11858890
Length = 380
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 85 FADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
F H D +H +A ++ T S D ++WD
Sbjct: 206 FKGHTDYLHSIAVREANRQVVTGSEDGTARIWD 238
>06_03_0823 -
25026949-25027551,25027635-25027742,25027994-25028107,
25028200-25028309,25028432-25028520,25028637-25028833,
25028961-25029122,25029255-25029373,25029488-25029541,
25029687-25029769,25029894-25029982,25030105-25030257,
25030373-25030465,25032070-25032136,25032238-25032350,
25033466-25033561,25034415-25034594
Length = 809
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 QWGNLRQPTYLRLKP-YSLITKILSTMLH 121
++GNLRQP Y LK +S+I I ++H
Sbjct: 308 EYGNLRQPKYGHLKDLHSVIKSIEKILVH 336
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 79 TIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDS 186
T +H + I D+ + ++AT SSD V++W++
Sbjct: 415 TKIEEHTNFITDIRFKPNSTQLATSSSDGTVRLWNA 450
>03_05_0700 +
26920743-26920771,26920880-26920991,26921205-26921306,
26921391-26921503,26921858-26921927,26922348-26922425,
26922500-26922616,26922738-26922832,26923080-26923159,
26923405-26923532
Length = 307
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 142 MATCSSDQYVKVWDSDG 192
+AT SSD VK+W+ DG
Sbjct: 241 LATASSDHTVKIWNVDG 257
>02_02_0602 +
12053929-12054081,12054241-12054498,12054611-12054712,
12054879-12055034,12055413-12055482,12055782-12055936,
12056011-12056100,12056183-12056254,12056409-12056468
Length = 371
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 148 TCSSDQYVKVWDSD 189
T S DQYVKVWD++
Sbjct: 121 TASFDQYVKVWDTN 134
>01_06_1405 +
37070395-37070484,37070599-37070700,37071403-37071472,
37071772-37071926,37072003-37072092,37072701-37072736
Length = 180
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 148 TCSSDQYVKVWDSD 189
T S DQYVKVWD++
Sbjct: 14 TASFDQYVKVWDTN 27
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 257 WAHPEFGQVIATCSFDRTAAIWE 325
W+ P + A+CS DRT +IW+
Sbjct: 271 WS-PTEADIFASCSADRTISIWD 292
>11_01_0204 -
1612505-1612636,1612809-1612926,1613050-1613162,
1613640-1613712,1613797-1613936,1614059-1614129,
1614262-1614430,1614625-1614690,1615081-1615179,
1615298-1615471,1615745-1615823,1615929-1616035,
1616395-1616439
Length = 461
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 257 WAHPEFGQVIATCSFDRTAAIWE 325
W+ P + A+CS DRT +IW+
Sbjct: 271 WS-PTEADIFASCSADRTISIWD 292
>07_03_1546 +
27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 218 VGKHTSGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 325
VG + +TW +P+F ++AT S + +W+
Sbjct: 169 VGSSAQAEISYLTW-NPKFQHILATASSNGMTVVWD 203
>06_03_0545 + 21983666-21986086
Length = 806
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 200 DGD*QLVGKHTSGSVWKVTW-AHPEFGQVIATCSFD 304
DG+ +L + S W VTW A P+ V C +
Sbjct: 252 DGNLRLYSLNNSSGTWSVTWMAFPQLCNVRGVCGIN 287
>02_01_0109 - 795066-796280
Length = 404
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KHTSGSVWKVTWAHPE-FGQVIATCSFDRTAAIWEEVGDTTASGS 355
+H VW + +A ++A+ S DRTA +W+ A+GS
Sbjct: 158 EHEGRRVWALDYARGGGAATMVASGSDDRTAHVWDPRAPAGAAGS 202
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 278 QVIATCSFDRTAAIWE 325
Q IA+CS D+T +WE
Sbjct: 228 QYIASCSMDKTMRVWE 243
>10_06_0006 -
9496990-9497592,9497695-9497802,9497884-9497997,
9498170-9498219,9498346-9498434,9498542-9498738,
9498877-9499038,9499337-9499455,9499579-9499666,
9499744-9499849,9499968-9500056,9500167-9500319,
9500434-9500526,9500625-9500691,9500811-9500923,
9501544-9501639,9501782-9501961
Length = 808
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 38 QWGNLRQPTYLRLKP-YSLITKILSTMLH 121
++GNLRQP Y LK +S++ + +LH
Sbjct: 327 EYGNLRQPKYGHLKELHSVLMSMEKILLH 355
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 70 EAQTIFADHKDLIHDVAYDFYGERM-ATCSSDQYVKVWD 183
+A +F H D++ DVA+ E + + D + +WD
Sbjct: 202 DAHHVFEAHDDVVEDVAWHLKDENLFGSAGDDCKLMMWD 240
>09_02_0030 +
3115502-3115750,3115835-3116104,3116193-3116633,
3116697-3116783,3116872-3116973,3117532-3117631,
3117791-3117807
Length = 421
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +1
Query: 82 IFADHKDLIHDVAYDFYGERMATCSSDQYVKVWD 183
I+ H+D + + + G+++A+ +D V +WD
Sbjct: 218 IYRGHEDEVCGLRWSGSGQQLASGGNDNLVHIWD 251
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 70 EAQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDG 192
E + K +++ V YG +A C D+ +K+W G
Sbjct: 396 ELMRVMKGDKQIVNCVEQHPYGIVIANCGIDKDIKIWAPGG 436
>06_03_0548 + 22004338-22006746
Length = 802
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 200 DGD*QLVGKHTSGSVWKVTW-AHPEFGQVIATCSFD 304
DG+ +L + S W VTW A P+ V C +
Sbjct: 257 DGNLRLYSLNDSSGTWSVTWMAFPQLCNVRGVCGIN 292
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 224 KHTSGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 325
K+ S S VT++ +++A+CS D T A+WE
Sbjct: 350 KYHSASCNAVTFSSDS--KLLASCSADTTVALWE 381
>04_04_1272 -
32288142-32288456,32288538-32288670,32288780-32289020,
32289124-32289340,32289557-32289681,32290873-32292157
Length = 771
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 338 YHQLPPRWQLYGQKNKLQ*LDQTLGVPM*LS 246
Y LP W+L+ Q + LD +G+P+ +S
Sbjct: 662 YSLLPHAWELWEQGRVMSLLDAMIGLPLSVS 692
>03_03_0181 +
15162681-15162806,15164026-15164172,15164269-15164355,
15165659-15165793,15165883-15165987,15166079-15166170,
15166259-15166364,15166463-15166549,15166653-15167084
Length = 438
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 263 HPEFGQVIATCSFDRTAAIWE 325
HP+ G+V+AT + DRT +W+
Sbjct: 313 HPD-GRVVATGNQDRTCRVWD 332
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 221 GKHTSGSVWKVTWAHPEFGQVIATCSFDRTAAIWE 325
G H S SV + W + E V+A+ S D+T IW+
Sbjct: 242 GSHRS-SVLGLAW-NKEVRNVLASASADKTVKIWD 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,057,571
Number of Sequences: 37544
Number of extensions: 265890
Number of successful extensions: 886
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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