Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H16
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 186 1e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 186 1e-47
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 185 2e-47
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 177 3e-45
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 89 2e-18
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 89 2e-18
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 89 2e-18
03_01_0034 + 318432-318825,318902-319851 89 2e-18
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 89 2e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 89 2e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 89 2e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 2e-18
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 50 2e-06
01_06_1440 + 37378121-37378958,37379344-37379494,37379567-373799... 33 0.19
05_04_0445 - 21316412-21317162,21317253-21317385,21317634-213177... 31 0.77
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 30 1.3
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 3.1
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 29 3.1
10_08_0233 - 16061182-16061714,16062765-16063578 28 4.1
01_06_1462 + 37530509-37530874,37531012-37531099,37531352-375314... 28 4.1
06_03_1016 - 26916978-26917244,26917499-26917642,26917708-269177... 28 5.4
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 28 5.4
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 7.2
05_06_0230 + 26585439-26586608 27 7.2
03_02_0791 + 11222291-11224237 27 9.5
01_06_0208 - 27540077-27540992,27541310-27541497 27 9.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 186 bits (452), Expect = 1e-47
Identities = 81/99 (81%), Positives = 92/99 (92%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
NRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLS
Sbjct: 228 NRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS 287
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
VAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPK
Sbjct: 288 VAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 117 bits (281), Expect = 7e-27
Identities = 51/70 (72%), Positives = 63/70 (90%)
Frame = +3
Query: 9 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 188
KKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
Query: 189 TYTNLQIVLS 218
TYTNL ++S
Sbjct: 223 TYTNLNRLVS 232
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 471 ACCTAVTS--CPKDVNAAIATIK 533
ACC PKDVNAA+ATIK
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIK 336
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 186 bits (452), Expect = 1e-47
Identities = 81/99 (81%), Positives = 92/99 (92%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
NRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLS
Sbjct: 228 NRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS 287
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
VAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPK
Sbjct: 288 VAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 117 bits (281), Expect = 7e-27
Identities = 51/70 (72%), Positives = 63/70 (90%)
Frame = +3
Query: 9 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 188
KKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
Query: 189 TYTNLQIVLS 218
TYTNL ++S
Sbjct: 223 TYTNLNRLVS 232
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 471 ACCTAVTS--CPKDVNAAIATIK 533
ACC PKDVNAA+ATIK
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIK 336
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 185 bits (450), Expect = 2e-47
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
NRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLS
Sbjct: 228 NRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS 287
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPK
Sbjct: 288 VPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 119 bits (286), Expect = 2e-27
Identities = 53/70 (75%), Positives = 63/70 (90%)
Frame = +3
Query: 9 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 188
KKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP
Sbjct: 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
Query: 189 TYTNLQIVLS 218
TYTNL ++S
Sbjct: 223 TYTNLNRLIS 232
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +3
Query: 471 ACCTAVTS--CPKDVNAAIATIK 533
ACC PKDVNAA+ATIK
Sbjct: 314 ACCLMYRGDVVPKDVNAAVATIK 336
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 177 bits (432), Expect = 3e-45
Identities = 77/99 (77%), Positives = 89/99 (89%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
NRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ S
Sbjct: 309 NRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHS 368
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V EITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPK
Sbjct: 369 VPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPK 407
Score = 93.5 bits (222), Expect = 1e-19
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 21/91 (23%)
Frame = +3
Query: 9 KKSKLEFAIYPAPQ---------------------VSTAVVEPYNSILTTHTTLEHSDCA 125
+KSKL F IYP+PQ +STAVVEPYNS+L+TH+ +EH+D
Sbjct: 223 RKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVV 282
Query: 126 FMVDNEAIYDICRRNLDIERPTYTNLQIVLS 218
++DNEAIYDIC+R+LDIERPTYTNL ++S
Sbjct: 283 VLLDNEAIYDICKRSLDIERPTYTNLNRLIS 313
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 324
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGD 224
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 225 LNHLISA 231
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 406 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 465
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 466 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 504
Score = 72.9 bits (171), Expect = 1e-13
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +
Sbjct: 345 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGD 404
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 405 LNHLISA 411
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 324
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGD 224
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 225 LNHLISA 231
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 324
Score = 72.9 bits (171), Expect = 1e-13
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGD 224
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 225 LNHLISA 231
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 324
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGD 224
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 225 LNHLISA 231
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 247 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 306
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 307 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 345
Score = 72.9 bits (171), Expect = 1e-13
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +
Sbjct: 186 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGD 245
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 246 LNHLISA 252
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 226 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 285
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTK 324
Score = 72.9 bits (171), Expect = 1e-13
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGD 224
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 225 LNHLISA 231
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+
Sbjct: 242 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALT 301
Query: 386 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPK 502
V E+T ++ N M DPRHG+Y+ ++RG + K
Sbjct: 302 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTK 340
Score = 73.3 bits (172), Expect = 1e-13
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +3
Query: 21 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 200
L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +
Sbjct: 181 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGD 240
Query: 201 LQIVLSA 221
L ++SA
Sbjct: 241 LNHLISA 247
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQL 382
N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + +
Sbjct: 229 NSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKT 288
Query: 383 SVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVP 499
+V ++ + N MV R+ KY++ + +G+V P
Sbjct: 289 TVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 9 KKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 185
KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 163 KKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLAN 222
Query: 186 PTYTNLQIVLS 218
PT+ ++S
Sbjct: 223 PTFAQTNSLVS 233
>01_06_1440 + 37378121-37378958,37379344-37379494,37379567-37379936,
37380021-37380431,37380522-37380820,37380897-37381155,
37381248-37381497,37381744-37381875,37381936-37382208,
37383023-37383267
Length = 1075
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 443 GHISPSGWRARSKRS*SPLQRAARGKPSR 357
GHI G R R + SPL+RAARG P++
Sbjct: 984 GHIRAQGRRDREHSTKSPLRRAARGPPAK 1012
>05_04_0445 -
21316412-21317162,21317253-21317385,21317634-21317721,
21317873-21318238
Length = 445
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 524 SDSRVDVLWARRHRGTTCSRPCICRDAGHISPS 426
+DS +L A+RHR TTC+ I DA +IS S
Sbjct: 155 ADSGKFLLSAKRHRKTTCTEYVISMDADNISRS 187
>01_01_0161 -
1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +1
Query: 160 AAVTWILNARPTPTSKSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQLGALPTYPFPTGHV 339
A + ++ RP TSK + D + + RRPQ + P LGAL P PT
Sbjct: 297 ACMKAFVHCRPVLTSKLWNKLDELTSKQTDEQSRRPQAEGDEPPVLLGALHDDP-PTMRR 355
Query: 340 RSSHLCRE 363
RS R+
Sbjct: 356 RSGSSIRK 363
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 263 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 391
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 294 VWNSVRSTLRAPSKRREAVIDDTIWPIR 211
+WN+ S R R EA+ID T W IR
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIR 340
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/98 (28%), Positives = 35/98 (35%)
Frame = +1
Query: 115 PIVLSWSTMKPSMTSAAVTWILNARPTPTSKSSYRPDRIIDYRLSAFRRRPQCRSNGVPD 294
P V + PS+T+ W R T + S R RL A RP +
Sbjct: 42 PSVAHANLPTPSVTAFRCRWCHPHRATRINDLSRR----CQARLLALPLRPTAATGHCQP 97
Query: 295 QLGALPTYPFPTGHVRSSHLCREGLPRAALCSGDHERL 408
G LP+ P P R HL + A LCS L
Sbjct: 98 PPGFLPSPPPPPSSRRRHHLGVPTVNGAPLCSSSSSAL 135
>01_06_1462 +
37530509-37530874,37531012-37531099,37531352-37531484,
37531567-37532326
Length = 448
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 506 VLWARRHRGTTCSRPCICRDAGHISPS 426
VL A+RHR TTC+ I +G+IS S
Sbjct: 161 VLAAKRHRKTTCTEYTISMVSGNISRS 187
>06_03_1016 -
26916978-26917244,26917499-26917642,26917708-26917783,
26917875-26918010,26918332-26918473,26920020-26920035,
26920222-26920574
Length = 377
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 240 VIDDTIWPIRRFGGWCRSGVQYPSYGGRCHRWLH 139
V+DD I + G +SG+Q +YG + R LH
Sbjct: 96 VVDDVIPEAFKVGSVYKSGIQLKTYGKKPRRALH 129
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 379 ALCSGDHERLLRARQPDGEM*PASRQIHGLLHVVPR*RRAQRTSTRL 519
A+C+ DHE + A + E+ P S++ L + R R A RL
Sbjct: 131 AVCAADHEPAITALEGSLELRPGSKETRAKLDMAKRNRDAFAEQERL 177
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1
Query: 330 SGKWIRG*GTKLVWNSVRSTLRAPSKRREAVIDDTIWPIRR 208
S W R W+ RS R+PS+ R D P RR
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARR 1285
>05_06_0230 + 26585439-26586608
Length = 389
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 299 LVPYPRI-HFPLVTYAPVISAEKAYHEQLSVAEITNAC 409
L+ P + HFP + Y PV+ K H Q+S+ T +C
Sbjct: 94 LLVLPNVTHFPDMVYPPVLGVVKRDH-QISIVAATLSC 130
>03_02_0791 + 11222291-11224237
Length = 648
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 177 IERPTYTNLQIVLSARSYHRLPPLCVSTAPSMS 275
+ RP + +VL A H LP LC+ SMS
Sbjct: 66 VHRPNAFSCNMVLKAAREHGLPHLCLPLYASMS 98
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 527 GSDSRVDVLWARRHRGTTCSRPCICRDAGHISPSGWRARSKR 402
G+ R DV W R G +R R GH +GWR +R
Sbjct: 109 GNPRRGDVSWDARD-GARAARRRRQRRVGHAEVAGWRRDQRR 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,258,230
Number of Sequences: 37544
Number of extensions: 409837
Number of successful extensions: 1174
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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