Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H16
(534 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 70 4e-14
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 70 4e-14
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 70 4e-14
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 70 4e-14
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 23 6.4
EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein. 23 8.5
EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein. 23 8.5
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 23 8.5
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.1 bits (164), Expect = 4e-14
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 27 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLQ 206
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 63 YSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122
Query: 207 IVLS 218
++S
Sbjct: 123 HLVS 126
Score = 59.7 bits (138), Expect = 6e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+
Sbjct: 122 NHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT 181
Query: 386 VAEIT 400
V E+T
Sbjct: 182 VPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.1 bits (164), Expect = 4e-14
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 27 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLQ 206
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 63 YSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122
Query: 207 IVLS 218
++S
Sbjct: 123 HLVS 126
Score = 59.7 bits (138), Expect = 6e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+
Sbjct: 122 NHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT 181
Query: 386 VAEIT 400
V E+T
Sbjct: 182 VPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.1 bits (164), Expect = 4e-14
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 27 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLQ 206
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 63 YSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122
Query: 207 IVLS 218
++S
Sbjct: 123 HLVS 126
Score = 59.7 bits (138), Expect = 6e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+
Sbjct: 122 NHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT 181
Query: 386 VAEIT 400
V E+T
Sbjct: 182 VPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 70.1 bits (164), Expect = 4e-14
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 27 FAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLQ 206
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 63 YSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLN 122
Query: 207 IVLS 218
++S
Sbjct: 123 HLVS 126
Score = 59.7 bits (138), Expect = 6e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 206 NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLS 385
N L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L+
Sbjct: 122 NHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALT 181
Query: 386 VAEIT 400
V E+T
Sbjct: 182 VPELT 186
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.0 bits (47), Expect = 6.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 249 REAVIDDTIWPIRRFGGWCRSGVQYPSYGGRCHRWLHCRP 130
REA DT+ P + F + V P G R L C P
Sbjct: 577 REASQIDTLEPAKGFSPQTQQPVNLPLVGVAVSRVLKCIP 616
>EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 22.6 bits (46), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 276 STLRAPSKRREAVIDDTIWPIRRFGGWCRSGVQY 175
S LR K+ + ++ I +R CRS VQY
Sbjct: 137 SCLRGQGKKNIYLANNKITMLRDLDEGCRSRVQY 170
>EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 22.6 bits (46), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 276 STLRAPSKRREAVIDDTIWPIRRFGGWCRSGVQY 175
S LR K+ + ++ I +R CRS VQY
Sbjct: 137 SCLRGQGKKNIYLANNKITMLRDLDEGCRSRVQY 170
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 22.6 bits (46), Expect = 8.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 276 STLRAPSKRREAVIDDTIWPIRRFGGWCRSGVQY 175
S LR K+ + ++ I +R CRS VQY
Sbjct: 137 SCLRGQGKKNIYLANNKITMLRDLDEGCRSRVQY 170
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,611
Number of Sequences: 2352
Number of extensions: 14220
Number of successful extensions: 119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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