Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H15
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 113 5e-26
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 113 6e-26
05_01_0043 - 295041-295173,296252-296537,296616-296697 113 6e-26
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 111 1e-25
01_07_0267 + 42410174-42410252,42410679-42411097 101 2e-22
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 48 4e-06
11_08_0005 + 27536091-27536761,27539697-27539890,27540097-275402... 30 0.76
05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462... 29 1.0
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544... 29 1.0
11_01_0259 + 1981554-1982249 29 1.3
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 29 1.3
12_01_0257 + 1898950-1899636 29 1.8
08_01_0804 - 7774631-7775152,7775985-7776083 29 1.8
04_03_0041 + 10046063-10046170,10046284-10046742 29 1.8
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 1.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 1.8
11_08_0023 + 27741775-27742475,27744163-27744413,27744557-277447... 28 2.3
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 28 3.1
11_01_0258 + 1978191-1978404,1978464-1978693,1979601-1979966 28 3.1
10_08_0401 + 17629912-17630376 28 3.1
08_01_0947 + 9399366-9399568,9399683-9399855,9400745-9401130,940... 28 3.1
01_01_0596 + 4435643-4436664,4437241-4437766 28 3.1
12_01_0271 - 1972992-1973585 27 4.1
12_01_0270 + 1969199-1969714 27 4.1
12_01_0267 - 1939123-1939722 27 4.1
12_02_0842 - 23588826-23589198,23589548-23590203 27 5.4
07_01_0430 - 3277844-3277851,3277893-3278096,3278214-3278303,327... 27 5.4
05_03_0043 - 7702940-7703077,7703361-7703420,7703562-7703612,770... 27 5.4
02_05_0692 + 30973171-30973908 27 5.4
11_04_0202 + 14771402-14771644 27 7.1
07_03_0066 - 13011785-13011998,13012570-13012730,13013396-130134... 27 7.1
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 27 7.1
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 7.1
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 26 9.4
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 26 9.4
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 26 9.4
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 113 bits (272), Expect = 5e-26
Identities = 49/82 (59%), Positives = 67/82 (81%)
Frame = +3
Query: 147 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 326
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 327 VAVLSAGSLDQPSNNYTLYKGF 392
+AV+ + ++ + Y L+ G+
Sbjct: 72 IAVIISTGINPKAKPYYLFDGY 93
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVMAGIIAI 314
Y F G +S + G A G A G A + +P+ + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 315 YGLVVAVLSAGSLDQ 359
YGL+V ++ + Q
Sbjct: 147 YGLIVGIILSSRAGQ 161
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 113 bits (271), Expect = 6e-26
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = +3
Query: 147 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 326
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 327 VAVLSAGSLDQPSNNYTLYKGF 392
+AV+ + ++ + Y L+ G+
Sbjct: 72 IAVIISTGINPKAKPYYLFDGY 93
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVMAGIIAI 314
Y F G +S + G A G A G A + +P+ + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 315 YGLVVAVLSAGSLDQ 359
YGL+V ++ + Q
Sbjct: 147 YGLIVGIILSSRAGQ 161
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 113 bits (271), Expect = 6e-26
Identities = 48/82 (58%), Positives = 67/82 (81%)
Frame = +3
Query: 147 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 326
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 327 VAVLSAGSLDQPSNNYTLYKGF 392
+AV+ + ++ + Y L+ G+
Sbjct: 73 IAVIISTGINPKAKPYFLFDGY 94
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 132 NPIYGPFF---GVMGAASAIIFSSLGAAYGTAKSGTGIAAMAV--MRPEQIMKSIIPVVM 296
NP P+F G +S + G A G A G A + +P+ + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 297 AGIIAIYGLVVAVLSAGSLDQ 359
A +A+YGL+V ++ + Q
Sbjct: 142 AEALALYGLIVGIILSSRAGQ 162
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 111 bits (268), Expect = 1e-25
Identities = 47/82 (57%), Positives = 67/82 (81%)
Frame = +3
Query: 147 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLV 326
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 327 VAVLSAGSLDQPSNNYTLYKGF 392
+AV+ + ++ + Y L+ G+
Sbjct: 74 IAVIISTGINPKAKPYFLFDGY 95
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 101 bits (242), Expect = 2e-22
Identities = 44/83 (53%), Positives = 62/83 (74%)
Frame = +3
Query: 141 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYG 320
+ PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPE +MKSI+PVVMAG++ IYG
Sbjct: 10 FAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVLGIYG 69
Query: 321 LVVAVLSAGSLDQPSNNYTLYKG 389
L++AV+ ++ + Y + G
Sbjct: 70 LIIAVIITTGINPTAMPYYHFDG 92
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +3
Query: 153 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 332
F +G A +I S LGAA+G +G+ + A+ P K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 333 VLSAGSLD 356
++ L+
Sbjct: 80 IILQTKLE 87
>11_08_0005 +
27536091-27536761,27539697-27539890,27540097-27540255,
27540385-27541493
Length = 710
Score = 29.9 bits (64), Expect = 0.76
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 164 GGGVCHHLQLPWCCIWHSQVRHRYCRHGGDAA*ADHEIHHSRCHGGYHCHLRTGRSCPEC 343
G G C P C HS + +G D RC G CH G +C
Sbjct: 259 GNGSCSGSVAPACVSEHSYCAN--ATNGDGYLYIDECKEPDRCSTGSRCHDTEGGYYCKC 316
Query: 344 RFPR 355
RFPR
Sbjct: 317 RFPR 320
>05_04_0162 +
18645459-18645827,18645934-18646149,18646224-18646278,
18646545-18646672,18647134-18647217,18648742-18648867,
18648949-18649086
Length = 371
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -3
Query: 334 TATTSP*MAMIPAMTTGMMDFMICSGRITAMAAIPVPDLAVPY 206
+AT S +A PA TTG CS TA+ PVP L Y
Sbjct: 8 SATASSLLAPAPA-TTGAAAAQCCSSSSTALFPTPVPSLRAYY 49
>05_01_0609 +
5443780-5443875,5444540-5445136,5448792-5448881,
5449615-5450121
Length = 429
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 124 WPKIQ-SMDLSLELWGRRLPSSSAPL 198
WP ++ S D LEL RRLPS++ PL
Sbjct: 126 WPSVKWSSDCLLELQHRRLPSTAPPL 151
>11_01_0259 + 1981554-1982249
Length = 231
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 263 ADHEIHHSRCHGGYHCHLRTGRSCPECRFPRPAQ 364
AD H +C + L R CP CRFP PA+
Sbjct: 163 ADSHCFHEQCIFSW---LLINRHCPLCRFPLPAE 193
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 148 LSLELWGRRLPSSSAPLVLHMAQPSQAPVLPPWR*CGLSRS 270
+S L GRR PS S +L + ++AP LPP C LS S
Sbjct: 87 VSAALVGRRRPSRSLRCLLLLGTSTRAPFLPP---CHLSGS 124
>12_01_0257 + 1898950-1899636
Length = 228
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 263 ADHEIHHSRCHGGYHCHLRTGRSCPECRFPRPAQ 364
AD H +C + L R CP CRFP PA+
Sbjct: 163 ADSHCFHEQCIFSW---LVINRHCPLCRFPLPAE 193
>08_01_0804 - 7774631-7775152,7775985-7776083
Length = 206
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -2
Query: 191 AEDDGRRRPHNSKERSIDWIFGHFS*MWEYLQVP--KTLMTICTH 63
A+ G R+ H + + D IFG + + +++P +TL+T+C H
Sbjct: 139 AQGHGGRQLHQIRYTTSDRIFGDYPLLSRKVRMPSPRTLLTVCHH 183
>04_03_0041 + 10046063-10046170,10046284-10046742
Length = 188
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 247 AMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP*IG 134
A A P P A P A K DAA PKK P G
Sbjct: 108 AKPAAPAPKAAAPKPAKDAAKPKKDAAAAKPKKAPAAG 145
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -2
Query: 254 HHRHGGN---TGA*LGCAICSTKGAEDDGRRRPHNSKERSI 141
HHRHGG+ + + G +T G++ DG R HN +E+ +
Sbjct: 140 HHRHGGHHHRSDSVRGGGTGATAGSDKDG-REVHNKEEKGM 179
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 346 PALRTATTSP*MAMIPAMTTGMMDFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAA 167
PA R A+ SP + + P + I + + + A P P AAP A
Sbjct: 277 PAARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAP 336
Query: 166 PITPKKGP 143
P P KGP
Sbjct: 337 PPPPPKGP 344
>11_08_0023 +
27741775-27742475,27744163-27744413,27744557-27744715,
27744976-27745409,27745537-27746076
Length = 694
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 233 YCRHGGDAA*ADHEIHHSRCHGGYHCHLRTGRSCPECRFPR 355
Y + G D RC G CH G +CRFPR
Sbjct: 309 YLKGNGGCTDIDECKEPDRCSTGSRCHNTEGYYYCKCRFPR 349
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 135 PIY--GPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 308
PI+ G FG+MGA F S GA + TA+ A + + I + + GI
Sbjct: 285 PIFTAGHSFGMMGAVLVSAFESTGAHFATARLAGATPPPASVLSRSVGLQGIGMFLEGIF 344
Query: 309 -AIYGLVVAVLSAGSL 353
A G V+V + G L
Sbjct: 345 GAPAGSSVSVENIGLL 360
>11_01_0258 + 1978191-1978404,1978464-1978693,1979601-1979966
Length = 269
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 314 LRTGRSCPECRFPRPAQQ 367
LR R CP CRF PA++
Sbjct: 242 LRVSRLCPHCRFALPAER 259
>10_08_0401 + 17629912-17630376
Length = 154
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 159 VMGAASAIIFSSLGAAYGTAKSGTGIAA 242
V GAA+ F++L AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>08_01_0947 +
9399366-9399568,9399683-9399855,9400745-9401130,
9401791-9402090,9402177-9402266,9403213-9403336,
9403452-9403615,9404572-9404802
Length = 556
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 237 AAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLSAG-SLDQPSNNYTLYKGF 392
A++ ++RP + + I V++ I + +AVL+AG S+ + + T ++GF
Sbjct: 463 ASIPLVRPGKSTAAFIKTVLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGF 515
>01_01_0596 + 4435643-4436664,4437241-4437766
Length = 515
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -2
Query: 284 NDGFHDLLRPHHRHGGNTGA*LGCAICSTKGAEDDGRRRPHNSKERSIDWIFGHFS*MWE 105
ND +H+L+ H+HG L C + S G D R S ++ + WI + WE
Sbjct: 210 NDPYHNLIHYPHQHGK-----LNCLVESPAG---DLMRVKRQSNDKFVVWILDKGTFSWE 261
>12_01_0271 - 1972992-1973585
Length = 197
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 314 LRTGRSCPECRFPRPAQ 364
LR CP CRFP P Q
Sbjct: 177 LRLSHRCPLCRFPMPTQ 193
>12_01_0270 + 1969199-1969714
Length = 171
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 281 HSRCHGGYHCHLRTGRSCPECRFPRPAQ 364
H RC + LR R CP CRF P+Q
Sbjct: 125 HQRCIFSW---LRISRICPVCRFTLPSQ 149
>12_01_0267 - 1939123-1939722
Length = 199
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 314 LRTGRSCPECRFPRPAQ 364
LR CP CRFP P Q
Sbjct: 179 LRLSHRCPLCRFPMPTQ 195
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 205 HMAQPSQAPVLPPWR*CGLSRS*NPSFPLS 294
H + AP+LPPW S S +PS LS
Sbjct: 155 HHRRMMAAPILPPWMSSSPSSSSSPSVTLS 184
>07_01_0430 -
3277844-3277851,3277893-3278096,3278214-3278303,
3279048-3279179,3279220-3279403
Length = 205
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 262 SGRITAMAAIPVPDLAVPYAAP 197
SG+++AMA+ PVP A P P
Sbjct: 19 SGKVSAMASPPVPSSAAPRRRP 40
>05_03_0043 -
7702940-7703077,7703361-7703420,7703562-7703612,
7705355-7705408,7707260-7707325,7707552-7707629,
7708568-7708970,7710492-7710493,7711076-7711078
Length = 284
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 245 HGGNTGA*LGCAICSTKGAEDDGRR 171
H GNTGA A +GA DDG++
Sbjct: 223 HNGNTGAQQPAAQPEQQGANDDGKK 247
>02_05_0692 + 30973171-30973908
Length = 245
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -2
Query: 245 HGGNTGA*LGCAICSTKGAEDDGRRRPHNSKERSIDWIFGH 123
+GG GC + + R+RP +S +R W+ H
Sbjct: 26 NGGGASGSRGCGLRHQRQRPSVWRQRPRSSSQRRRQWLLWH 66
>11_04_0202 + 14771402-14771644
Length = 80
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 282 IPVVMAGIIAIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
I V +A+ + AVL+AGS+ + N YKGF
Sbjct: 14 IRFVFGVAVAVVVAMAAVLTAGSMAAAAPNGLTYKGF 50
>07_03_0066 -
13011785-13011998,13012570-13012730,13013396-13013464,
13014228-13014449
Length = 221
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -2
Query: 209 ICSTKGAEDDGRRRP---HNSKERSIDWIF 129
+CSTKG E R P SKE DW+F
Sbjct: 175 VCSTKGVEVKDRFHPFLLDASKETFPDWLF 204
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 262 SGRITAMAAIPVPDLAVPYAAP 197
S T + +PVP AVPYAAP
Sbjct: 148 SAASTTHSVLPVPVPAVPYAAP 169
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 227 HRYCRHGGDAA*ADHEIHHSRCHGGYHCH 313
H Y RHGGD EI R GG+H H
Sbjct: 134 HHYHRHGGDDFLPADEIR--RVGGGHHHH 160
>12_02_0928 +
24488891-24489675,24490369-24490421,24490479-24491229,
24491322-24491533,24491780-24492570,24492686-24492784
Length = 896
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 1 NSAEVQSLGHIVCAK--VVSWSECVQIV 78
+S+ ++SLGH+VC + + W E Q++
Sbjct: 831 SSSSLKSLGHVVCDEETALLWREAEQVI 858
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 304 IPAMTTGMMDFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPI 161
+PA G D + AMA +P AVP P A AAP+
Sbjct: 912 LPARHAGCDDVSLVEKFRNAMAKRDLPTAAVPPTTPPPAAAAAAAAPV 959
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 323 QSVDGNDTRHDNGNDGFHDLLRPHHRHGGNTGA*LG 216
QS+ G + NG H++ PHH+H G +G
Sbjct: 506 QSIQGQVSFAYNGLTSQHNIASPHHQHQQVGGVGIG 541
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,128,498
Number of Sequences: 37544
Number of extensions: 369794
Number of successful extensions: 1106
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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