Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H15
(393 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 119 6e-28
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 119 6e-28
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 119 6e-28
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 119 6e-28
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 118 2e-27
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 118 2e-27
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 39 0.001
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 39 0.001
AF040641-5|AAB94944.1| 379|Caenorhabditis elegans Hypothetical ... 29 0.90
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 1.2
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 28 2.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 4.8
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 27 6.3
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 27 6.3
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 27 6.3
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 26 8.4
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 119 bits (287), Expect = 6e-28
Identities = 59/96 (61%), Positives = 69/96 (71%)
Frame = +3
Query: 105 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 284
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 285 PVVMAGIIAIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
PV+MAGII IYGLVVA++ G + S Y L KGF
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGF 96
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +3
Query: 153 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 332
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 333 VL 338
++
Sbjct: 156 LI 157
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 119 bits (287), Expect = 6e-28
Identities = 59/96 (61%), Positives = 69/96 (71%)
Frame = +3
Query: 105 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 284
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 285 PVVMAGIIAIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
PV+MAGII IYGLVVA++ G + S Y L KGF
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGF 96
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +3
Query: 153 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 332
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 333 VL 338
++
Sbjct: 156 LI 157
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 119 bits (287), Expect = 6e-28
Identities = 59/96 (61%), Positives = 69/96 (71%)
Frame = +3
Query: 105 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 284
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 285 PVVMAGIIAIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
PV+MAGII IYGLVVA++ G + S Y L KGF
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGF 96
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +3
Query: 153 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 332
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 333 VL 338
++
Sbjct: 156 LI 157
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 119 bits (287), Expect = 6e-28
Identities = 59/96 (61%), Positives = 69/96 (71%)
Frame = +3
Query: 105 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 284
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 285 PVVMAGIIAIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
PV+MAGII IYGLVVA++ G + S Y L KGF
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGF 96
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +3
Query: 153 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 332
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 333 VL 338
++
Sbjct: 156 LI 157
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 118 bits (283), Expect = 2e-27
Identities = 53/88 (60%), Positives = 70/88 (79%)
Frame = +3
Query: 129 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 308
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 309 AIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
AIYGLVVAV+ +G ++ NYT+ F
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAF 104
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 195 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVL 338
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA++
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALI 165
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 118 bits (283), Expect = 2e-27
Identities = 53/88 (60%), Positives = 70/88 (79%)
Frame = +3
Query: 129 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 308
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 309 AIYGLVVAVLSAGSLDQPSNNYTLYKGF 392
AIYGLVVAV+ +G ++ NYT+ F
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAF 104
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 195 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVL 338
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA++
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALI 165
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 162 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLS 341
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 342 AGSL 353
G L
Sbjct: 114 VGKL 117
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 162 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLS 341
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 342 AGSL 353
G L
Sbjct: 114 VGKL 117
>AF040641-5|AAB94944.1| 379|Caenorhabditis elegans Hypothetical
protein D1069.4 protein.
Length = 379
Score = 29.5 bits (63), Expect = 0.90
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 390 TLYTGCSYC---WAGLGNLHSGQLRPVRRWQ 307
TLY G + W LGN+HS L+P WQ
Sbjct: 123 TLYMGGALAFIRWQALGNIHSKWLQPRNSWQ 153
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 350 GTCTQDSYDQSVDGNDTRHDNGNDGF 273
G QDSYDQ GND +D GN G+
Sbjct: 345 GNANQDSYDQ---GNDYGNDYGNAGY 367
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 212 HSQVRHRYCRHGGDAA*ADHEIHHS-RCHGGYHCH 313
H + H HGG +E HH HGG+H H
Sbjct: 50 HHEESHHGEHHGGHHGVQHYESHHESHHHGGHHGH 84
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 212 HSQVRHRYCRHGGDAA*ADHEIHHSRCHGGYH 307
H H + H GD H +HH HG +H
Sbjct: 632 HHAPHHEHHEHHGDHHHGSHGVHHGH-HGTHH 662
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 341 TQDSYDQSVDGNDTRHDNGNDGFHDLL 261
++ SYDQ+ DG +H N FHD L
Sbjct: 893 SRHSYDQN-DGQHRKHSNKYKQFHDFL 918
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 341 TQDSYDQSVDGNDTRHDNGNDGFHDLL 261
++ SYDQ+ DG +H N FHD L
Sbjct: 871 SRHSYDQN-DGQHRKHSNKYKQFHDFL 896
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 341 TQDSYDQSVDGNDTRHDNGNDGFHDLL 261
++ SYDQ+ DG +H N FHD L
Sbjct: 893 SRHSYDQN-DGQHRKHSNKYKQFHDFL 918
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 277 DFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP 143
D + + + A+ V D+AV A+P E + A+P++ + P
Sbjct: 31 DETLIASKTIQTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 277 DFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP 143
D + + + A+ V D+AV A+P E + A+P++ + P
Sbjct: 31 DETLIASKTIQTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,181,463
Number of Sequences: 27780
Number of extensions: 273033
Number of successful extensions: 732
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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