Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H14
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   215   3e-56
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   215   3e-56
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   215   3e-56
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   215   3e-56
AE014134-1550|AAF52699.1|  674|Drosophila melanogaster CG9289-PA...    30   1.8  
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    29   2.4  
S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    29   2.4  
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    29   2.4  
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    29   2.4  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    28   7.4  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  215 bits (524), Expect = 3e-56
 Identities = 109/158 (68%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   IIRHEDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 180
           I++  DKVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+P ILDIKPEDLR KF  GV
Sbjct: 160 ILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGV 219

Query: 181 ANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXX 360
           AN+AA+ LS+GYPT+ASAPHSIANGFKNLLAIAA TEV+FKEATTIKEYIKDPSKF    
Sbjct: 220 ANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAA 279

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 471
                                   S E DDDMGFGLFD
Sbjct: 280 SASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  215 bits (524), Expect = 3e-56
 Identities = 109/158 (68%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   IIRHEDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 180
           I++  DKVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+P ILDIKPEDLR KF  GV
Sbjct: 160 ILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGV 219

Query: 181 ANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXX 360
           AN+AA+ LS+GYPT+ASAPHSIANGFKNLLAIAA TEV+FKEATTIKEYIKDPSKF    
Sbjct: 220 ANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAA 279

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 471
                                   S E DDDMGFGLFD
Sbjct: 280 SASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  215 bits (524), Expect = 3e-56
 Identities = 109/158 (68%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   IIRHEDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 180
           I++  DKVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+P ILDIKPEDLR KF  GV
Sbjct: 160 ILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGV 219

Query: 181 ANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXX 360
           AN+AA+ LS+GYPT+ASAPHSIANGFKNLLAIAA TEV+FKEATTIKEYIKDPSKF    
Sbjct: 220 ANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAA 279

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 471
                                   S E DDDMGFGLFD
Sbjct: 280 SASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  215 bits (524), Expect = 3e-56
 Identities = 109/158 (68%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   IIRHEDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 180
           I++  DKVGASEATLLNMLNISPFSYGL+V QVYDSG+IF+P ILDIKPEDLR KF  GV
Sbjct: 160 ILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGV 219

Query: 181 ANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXX 360
           AN+AA+ LS+GYPT+ASAPHSIANGFKNLLAIAA TEV+FKEATTIKEYIKDPSKF    
Sbjct: 220 ANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAA 279

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXS-ESDDDMGFGLFD 471
                                   S E DDDMGFGLFD
Sbjct: 280 SASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317


>AE014134-1550|AAF52699.1|  674|Drosophila melanogaster CG9289-PA
           protein.
          Length = 674

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 37  ATLLNMLNISP-FSYGLVVKQVYDSGTIFAPAILDIKP 147
           A L+N+L +SP    GL  + +Y SGT  +PA +   P
Sbjct: 263 AALVNVLTLSPAVPAGLFHRVIYQSGTALSPAFITDAP 300


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 436 ESDDDMGFGLFD 471
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 436 ESDDDMGFGLFD 471
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 436 ESDDDMGFGLFD 471
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 436 ESDDDMGFGLFD 471
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 183  GHSSKELLAKVLRLDVENCRRED-GTGVVHLFDNKTIRKGRDVQHVEKSSF 34
            GH  K LLA++ RL+ E CR+     G+ +L  N  +    + QH   S+F
Sbjct: 1499 GH--KVLLAQMYRLEKERCRKPQLRGGLANLSMNMGVEAEAEEQHQSFSAF 1547


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.135    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,801,721
Number of Sequences: 53049
Number of extensions: 289797
Number of successful extensions: 988
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)