Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H14
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 178 2e-45
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 31 0.56
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 31 0.56
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 31 0.56
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 31 0.56
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 27 9.1
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 27 9.1
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 178 bits (433), Expect = 2e-45
Identities = 84/157 (53%), Positives = 109/157 (69%)
Frame = +1
Query: 1 IIRHEDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 180
+I+ DKVGASE+ LLNML ++PFSYGLVV+QVYD GT++ P +LD+ E+LR++FL+GV
Sbjct: 160 LIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGV 219
Query: 181 ANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXX 360
NVA++SL++ YPT+AS HS+ANG +N+L +AAVT+V FKEA TIK +I DPSKF
Sbjct: 220 RNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF---- 275
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 471
ESDDDMGFGLFD
Sbjct: 276 AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 436 ESDDDMGFGLFD 471
ESDDDMGFGLFD
Sbjct: 96 ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 436 ESDDDMGFGLFD 471
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 436 ESDDDMGFGLFD 471
ESDDDMGFGLFD
Sbjct: 99 ESDDDMGFGLFD 110
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 436 ESDDDMGFGLFD 471
ESDDDMGFGLFD
Sbjct: 100 ESDDDMGFGLFD 111
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 25 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 204
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 205 S 207
+
Sbjct: 630 A 630
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 25 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 204
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 205 S 207
+
Sbjct: 630 A 630
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 25 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 204
G S+ +L L+ +G V ++ D G++ A + + + R LAG A SL
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 563
Query: 205 S 207
+
Sbjct: 564 A 564
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 206 DNESAATLATPARNFSRRSSGLMSRIAGAKMVPES 102
D + L PA + R+ S +MSR AG+K P S
Sbjct: 72 DASKRSGLKAPAASAIRKDSSVMSRSAGSKASPGS 106
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 197 SRCPSGTRRSRLRLIPSR 250
SRC GT SR LIPSR
Sbjct: 333 SRCSGGTPTSRTSLIPSR 350
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 197 SRCPSGTRRSRLRLIPSR 250
SRC GT SR LIPSR
Sbjct: 229 SRCSGGTPTSRTSLIPSR 246
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 197 SRCPSGTRRSRLRLIPSR 250
SRC GT SR LIPSR
Sbjct: 279 SRCSGGTPTSRTSLIPSR 296
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 197 SRCPSGTRRSRLRLIPSR 250
SRC GT SR LIPSR
Sbjct: 333 SRCSGGTPTSRTSLIPSR 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,360,828
Number of Sequences: 27780
Number of extensions: 141205
Number of successful extensions: 486
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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