Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H14
(473 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.10
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 25 0.55
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 25 0.55
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.9
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 27.1 bits (57), Expect = 0.10
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 198 LVVHRVPDGRVCASFHRERFQEPARHRC 281
L +H +P+ +V F +R +E A RC
Sbjct: 396 LTIHTIPEVKVTPRFQAKRLKEEANIRC 423
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 24.6 bits (51), Expect = 0.55
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 61 ISPFSYGLVVKQVYDSGTIFAP 126
ISP + GLV + + SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 24.6 bits (51), Expect = 0.55
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 61 ISPFSYGLVVKQVYDSGTIFAP 126
ISP + GLV + + SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 112 YRSRTPV*QQDHTKRERC 59
YR + +D T+RERC
Sbjct: 59 YRETSKERSRDRTERERC 76
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 118 RWYRSRTPV*QQDHTKRER 62
R YR R+ +D T+RER
Sbjct: 57 RKYRERSKERSRDRTERER 75
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 118 RWYRSRTPV*QQDHTKRER 62
R YR R+ +D T+RER
Sbjct: 57 RKYRERSKERSRDRTERER 75
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 118 RWYRSRTPV*QQDHTKRER 62
R YR R+ +D T+RER
Sbjct: 290 RKYRERSKERSRDRTERER 308
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.135 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,002
Number of Sequences: 438
Number of extensions: 1814
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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