SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H11
         (350 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   1.8  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   3.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   5.6  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   5.6  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    20   7.4  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    20   7.4  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    20   7.4  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    20   7.4  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    20   7.4  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    20   7.4  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    20   7.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    20   7.4  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    20   7.4  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    20   7.4  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    20   7.4  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    20   7.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    20   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.8  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -1

Query: 227 HLRRTEANQRDAAINALINATPSSTRKKTRRHHQRANKR 111
           H +  E+  R  ++   +  TP++ ++  RR   R N+R
Sbjct: 143 HEKLVESFPRGGSLPTPVTPTPTTVQQLLRRAQIRRNER 181


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 98  NEQYKANTSQTTIEQCE*HYNYHENK 21
           NE+Y  +  Q T +  + HY  +  K
Sbjct: 114 NEEYTGDDCQKTYQYVQCHYKQNPEK 139


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYK-NENSYRKY 292


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 251 RKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYK-NENSYRKY 297


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQYKANTSQTTIEQCE*HYNYHENKTIKF 9
           RKK RR+ +  N+++  + E+        + E+ +  Y  +EN   K+
Sbjct: 13  RKKDRRYEKLHNEKEKFLEERTSRKRYSRSREREQKSYK-NENSYRKY 59


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 13  RKKDRRYEKLHNEKEKLLEER 33


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 13  RKKDRRYEKLHNEKEKLLEER 33


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 13  RKKDRRYEKLHNEKEKLLEER 33


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 13  RKKDRRYEKLHNEKEKLLEER 33


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 13  RKKDRRYEKLHNEKEKLLEER 33


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 235 RKKDRRYEKLHNEKEKLLEER 255


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 152 RKKTRRHHQRANKRDAAINEQ 90
           RKK RR+ +  N+++  + E+
Sbjct: 246 RKKDRRYEKLHNEKEKLLEER 266


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -1

Query: 149  KKTRRHHQRANKRDAAINEQYKANTSQTT 63
            K   RH  R  KRD   ++     TS  T
Sbjct: 1079 KVKERHLMRPRKRDQKQSDDKTKETSTVT 1107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,525
Number of Sequences: 438
Number of extensions: 1223
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

- SilkBase 1999-2023 -