Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H09
(495 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 120 1e-27
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 120 1e-27
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 120 1e-27
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 120 1e-27
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 120 1e-27
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 60 2e-09
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 60 2e-09
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 45 5e-05
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 45 5e-05
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 45 5e-05
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.37
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.37
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.37
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.37
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.37
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.37
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 29 3.5
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 29 3.5
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 29 3.5
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 29 3.5
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 120 bits (289), Expect = 1e-27
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
Query: 451 ALVHRK 468
LV RK
Sbjct: 197 RLVRRK 202
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 102 LPPPINQFTQTLDKTTAKGLFKILEKYRPET 194
+PPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 81 VPPPIHQFSQTLDKTTAVKLFKLLEKYRPES 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/24 (79%), Positives = 21/24 (87%), Gaps = 2/24 (8%)
Frame = +2
Query: 38 VRWPKYIRIQRQKAVLQRPL--PP 103
VRWPKYIR+QRQKAVLQ+ L PP
Sbjct: 60 VRWPKYIRVQRQKAVLQKRLKVPP 83
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 120 bits (289), Expect = 1e-27
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
Query: 451 ALVHRK 468
LV RK
Sbjct: 197 RLVRRK 202
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 102 LPPPINQFTQTLDKTTAKGLFKILEKYRPET 194
+PPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 81 VPPPIHQFSQTLDKTTAVKLFKLLEKYRPES 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/24 (79%), Positives = 21/24 (87%), Gaps = 2/24 (8%)
Frame = +2
Query: 38 VRWPKYIRIQRQKAVLQRPL--PP 103
VRWPKYIR+QRQKAVLQ+ L PP
Sbjct: 60 VRWPKYIRVQRQKAVLQKRLKVPP 83
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 120 bits (289), Expect = 1e-27
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
Query: 451 ALVHRK 468
LV RK
Sbjct: 197 RLVRRK 202
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 102 LPPPINQFTQTLDKTTAKGLFKILEKYRPET 194
+PPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 81 VPPPIHQFSQTLDKTTAVKLFKLLEKYRPES 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/24 (79%), Positives = 21/24 (87%), Gaps = 2/24 (8%)
Frame = +2
Query: 38 VRWPKYIRIQRQKAVLQRPL--PP 103
VRWPKYIR+QRQKAVLQ+ L PP
Sbjct: 60 VRWPKYIRVQRQKAVLQKRLKVPP 83
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 120 bits (289), Expect = 1e-27
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
Query: 451 ALVHRK 468
LV RK
Sbjct: 197 RLVRRK 202
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 102 LPPPINQFTQTLDKTTAKGLFKILEKYRPET 194
+PPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 81 VPPPIHQFSQTLDKTTAVKLFKLLEKYRPES 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/24 (79%), Positives = 21/24 (87%), Gaps = 2/24 (8%)
Frame = +2
Query: 38 VRWPKYIRIQRQKAVLQRPL--PP 103
VRWPKYIR+QRQKAVLQ+ L PP
Sbjct: 60 VRWPKYIRVQRQKAVLQKRLKVPP 83
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 120 bits (289), Expect = 1e-27
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
+P+ + AGTNTVTKL+E+KKAQLVVIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG
Sbjct: 137 KPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
Query: 451 ALVHRK 468
LV RK
Sbjct: 197 RLVRRK 202
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 102 LPPPINQFTQTLDKTTAKGLFKILEKYRPET 194
+PPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 81 VPPPIHQFSQTLDKTTAVKLFKLLEKYRPES 111
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/24 (79%), Positives = 21/24 (87%), Gaps = 2/24 (8%)
Frame = +2
Query: 38 VRWPKYIRIQRQKAVLQRPL--PP 103
VRWPKYIR+QRQKAVLQ+ L PP
Sbjct: 60 VRWPKYIRVQRQKAVLQKRLKVPP 83
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +1
Query: 277 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +1
Query: 277 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 283 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 453
LR G V + K + + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 283 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 453
LR G V + K + + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 283 LRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGA 453
LR G V + K + + + A DV P++++ LPA+C + G+PY ++ LGA
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 271 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 372
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 292 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 53 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 105
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 292 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 292 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 292 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 450
G + K ++K++A L ++A D + ALC + +P V +LG
Sbjct: 41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLG 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,776,826
Number of Sequences: 53049
Number of extensions: 454199
Number of successful extensions: 1502
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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