Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H08
         (220 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   1.3  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           22   2.2  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    21   6.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   6.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    20   9.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    20   9.0  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 103 CFKIILFYVVFYYLI 147
           CF ++ F++ +YY +
Sbjct: 569 CFVVLTFFIYYYYAV 583


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -2

Query: 108 KTDHMLSILSNQRSVR-*PPGSMFRR 34
           +T H++ ++  QRS R  P GS +RR
Sbjct: 88  RTKHVVDMIQAQRSPRGGPGGSNYRR 113


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 1   LIKGTKLYHAGASKHGPRWLSDR 69
           L++  K +H        RWL+DR
Sbjct: 415 LLRDEKYFHRPTEFIPERWLNDR 437


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 45  WTPVVIGQIVDLIRCSTYDLF*DNIILCSFLLFNIHLWF 161
           W P  I  I DL+  +   +  +N I   ++++   L F
Sbjct: 539 WVPSTIANIFDLLADAKRVVKTNNSISMPYIIYQCMLMF 577


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 120  ILCSFLLFNI 149
            +LCSFL+ N+
Sbjct: 1410 VLCSFLIINL 1419


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 94  HMICFKIILFYVVFYYLIFICGSV 165
           HM+ F +I+F   FY +  I   V
Sbjct: 403 HMLFFIVIIFLGSFYLVNLILAIV 426


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,090
Number of Sequences: 2352
Number of extensions: 3288
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 50
effective length of database: 446,379
effective search space used:  9820338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)