Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H08
         (220 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      26   0.061
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   2.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   3.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   4.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   4.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   4.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   9.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   9.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.2  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 0.061
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 133 KLHRIILS*NRSYVEHLIKSTIC 65
           K HR++LS    Y   L+KST C
Sbjct: 44  KAHRVVLSACSPYFRELLKSTPC 66


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 157 GSVYAI*AESHLYIPPVGVIY 219
           G+ Y I + SH Y  P+ V+Y
Sbjct: 56  GASYDIESNSHQYKNPIIVMY 76


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 45  WTPVVIGQIVDLIRCSTYDL 104
           W  +++G I   I C T  L
Sbjct: 309 WESIIVGMIGAFITCFTMPL 328


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 97  MICFKIILFYVVFYYL 144
           ++C   +LF  ++YYL
Sbjct: 7   ILCGIAVLFLALYYYL 22


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 212 TPTGGIYKCDSA 177
           T  GG+YKC +A
Sbjct: 463 TNDGGLYKCIAA 474


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 45 WTPVVIGQIVDLIRC 89
          W P   G++VDL +C
Sbjct: 10 WCPDNDGKMVDLTQC 24


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 42  TWTPVVIGQIVDLIRCS 92
           TW  V++GQ +  + CS
Sbjct: 420 TWDGVLMGQRLLTMSCS 436


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 110  LKQIIC*ASYQINDLSDNHRGPCLDAP 30
            LK ++C  +YQ+   S N  G    +P
Sbjct: 1462 LKGLLCGNTYQLYLTSHNKIGSSPSSP 1488


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 110  LKQIIC*ASYQINDLSDNHRGPCLDAP 30
            LK ++C  +YQ+   S N  G    +P
Sbjct: 1458 LKGLLCGNTYQLYLTSHNKIGSSPSSP 1484


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,613
Number of Sequences: 438
Number of extensions: 929
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)