Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H07
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    26   0.16 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.4  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   7.9  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   7.9  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   7.9  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   7.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.9  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   7.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 200 SDQQG*LGSKKKNKNPRPQN 259
           S+ +G    KK+NKNP+P+N
Sbjct: 17  SEFEGASSPKKRNKNPQPKN 36


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 173 LGASTEGTKSQKVTSTEVSGSIPGS 99
           +G  +  T +   TST  SGS+P S
Sbjct: 220 MGRPSYTTATMATTSTPGSGSLPAS 244



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 85  WVFLISIVPESGICARY 35
           W FL+ ++ +   C RY
Sbjct: 461 WEFLLKLLQDREYCPRY 477


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 KLTANIKHKIVHNKNRRPFTSFHIYNRK 424
           K+ +++ +  +HN N +   + + YN+K
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 KLTANIKHKIVHNKNRRPFTSFHIYNRK 424
           K+ +++ +  +HN N +   + + YN+K
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 KLTANIKHKIVHNKNRRPFTSFHIYNRK 424
           K+ +++ +  +HN N +   + + YN+K
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +2

Query: 341 KLTANIKHKIVHNKNRRPFTSFHIYNRK 424
           K+ +++ +  +HN N +   + + YN+K
Sbjct: 80  KIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -2

Query: 221 LANPVDRKGLYSFTVTLGASTEGTKSQKVTSTEVSGSI 108
           +++  DR+ L+ FT++      GT +   T+  +   +
Sbjct: 365 ISSKKDRQELWIFTISFQKYMSGTLNSNETNFRIQAGL 402


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 214 LARFEKKKQKPETSERQSYRNTT 282
           L R + K + PE+ +R +  NT+
Sbjct: 80  LERSKTKSKSPESRDRSNTSNTS 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,674
Number of Sequences: 438
Number of extensions: 2400
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)