Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H06
(146 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 0.44
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 0.44
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 0.44
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 1.8
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 19 4.1
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 19 4.1
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 19 4.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 19 4.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 19 4.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 4.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 19 4.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 19 7.1
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 0.44
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 45 QIFYYKSKLFLRIKFIFPK-IEIVLDWTNIWAQRN 146
+I + +S + I+ P + +++ W + W RN
Sbjct: 213 EIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRN 247
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 0.44
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 45 QIFYYKSKLFLRIKFIFPK-IEIVLDWTNIWAQRN 146
+I + +S + I+ P + +++ W + W RN
Sbjct: 213 EIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRN 247
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 0.44
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 45 QIFYYKSKLFLRIKFIFPK-IEIVLDWTNIWAQRN 146
+I + +S + I+ P + +++ W + W RN
Sbjct: 152 EIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRN 186
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 1.8
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2
Query: 133 QILVQSNTISIFGNINFI 80
++ +Q+N I GN+ F+
Sbjct: 870 ELYLQNNLIGFIGNLTFL 887
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 130 ILVQSNTISIFGNIN 86
ILV + +++FGN N
Sbjct: 7 ILVVTFVVAVFGNTN 21
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 130 ILVQSNTISIFGNIN 86
ILV + +++FGN N
Sbjct: 8 ILVVTFVVAVFGNTN 22
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 130 ILVQSNTISIFGNIN 86
ILV + +++FGN N
Sbjct: 8 ILVVTFVVAVFGNTN 22
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 12 DADSKRSVVKFQIFYYKSKLFLRIKFIF 95
D ++VV+ +++YK +FL IF
Sbjct: 70 DMYKDKNVVQKFLWWYKQGMFLSRNAIF 97
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 12 DADSKRSVVKFQIFYYKSKLFLRIKFIF 95
D ++VV+ +++YK +FL IF
Sbjct: 70 DMYKDKNVVQKFLWWYKQGMFLSRNAIF 97
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/12 (41%), Positives = 7/12 (58%)
Frame = +3
Query: 108 IVLDWTNIWAQR 143
+VL W + W R
Sbjct: 259 VVLSWVSFWIHR 270
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/12 (41%), Positives = 7/12 (58%)
Frame = +3
Query: 108 IVLDWTNIWAQR 143
+VL W + W R
Sbjct: 228 VVLSWVSFWLNR 239
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.6 bits (36), Expect = 7.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 136 AQILVQSNTISIFGNINFIL 77
A ILV +++FGN+ IL
Sbjct: 190 ALILVIVPCLTLFGNVLVIL 209
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,479
Number of Sequences: 438
Number of extensions: 413
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 29
effective length of database: 133,641
effective search space used: 2539179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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