Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H05
(271 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 137 1e-33
04_01_0103 + 1082077-1082167,1083037-1085477 135 5e-33
02_04_0017 + 18937774-18937864,18938505-18940945 135 5e-33
01_06_0662 + 30987187-30987277,30987825-30990214 132 5e-32
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 90 2e-19
02_04_0148 - 20198407-20201424 33 0.031
03_05_0511 + 25056018-25059107 32 0.055
09_01_0098 + 1486683-1486910 28 0.89
01_05_0175 - 18936752-18937621,18938855-18941641 28 1.2
11_04_0041 - 12690287-12690816,12691087-12691378 27 1.6
11_06_0475 - 24042889-24043226,24043621-24043714 27 2.1
01_07_0369 - 43111835-43111882,43112172-43112245,43112670-431127... 27 2.1
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 26 3.6
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 25 6.3
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 25 6.3
06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781 25 6.3
02_05_0907 - 32663544-32663623,32663673-32663863,32664065-326641... 25 6.3
01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,747... 25 6.3
11_06_0560 - 24978894-24979030,24979106-24979310,24979421-249797... 25 8.3
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 25 8.3
08_01_0648 + 5602454-5602513,5602913-5603000,5603128-5604248,560... 25 8.3
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 25 8.3
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 137 bits (331), Expect = 1e-33
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +3
Query: 21 NILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEENLRGVRFNIYDVTLHTDAIHRGGG 200
N+LVD KGVQYL+EIKDSVVAGFQWA +EGA+AEEN+RGV F + DVTLH+D+IHRGGG
Sbjct: 655 NLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGG 714
Query: 201 QIIPTTRRCLYACLLTAQPRLME 269
Q+IPT RR +YA LTA PRLME
Sbjct: 715 QLIPTARRAMYAAQLTASPRLME 737
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 135 bits (326), Expect = 5e-33
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 21 NILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEENLRGVRFNIYDVTLHTDAIHRGGG 200
N++VD KGVQYLNEIKDSVVAGFQWA +EGA+AEEN+RG+ F + DV LH DAIHRGGG
Sbjct: 645 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGG 704
Query: 201 QIIPTTRRCLYACLLTAQPRLME 269
Q+IPT RR +YA LTA+PRL+E
Sbjct: 705 QVIPTARRVIYASQLTAKPRLLE 727
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 135 bits (326), Expect = 5e-33
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +3
Query: 21 NILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEENLRGVRFNIYDVTLHTDAIHRGGG 200
N++VD KGVQYLNEIKDSVVAGFQWA +EGA+AEEN+RG+ F + DV LH DAIHRGGG
Sbjct: 645 NMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGG 704
Query: 201 QIIPTTRRCLYACLLTAQPRLME 269
Q+IPT RR +YA LTA+PRL+E
Sbjct: 705 QVIPTARRVIYASQLTAKPRLLE 727
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 132 bits (318), Expect = 5e-32
Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 2/85 (2%)
Frame = +3
Query: 21 NILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEENL--RGVRFNIYDVTLHTDAIHRG 194
NI+VD KGVQYLNEIKDSVVAGFQWA +EGA+AEEN+ RG+ F + DV LH+DAIHRG
Sbjct: 641 NIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRG 700
Query: 195 GGQIIPTTRRCLYACLLTAQPRLME 269
GGQIIPT RR +YA LTA+PRL+E
Sbjct: 701 GGQIIPTARRVIYAAQLTAKPRLLE 725
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 90.2 bits (214), Expect = 2e-19
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = +3
Query: 21 NILVDCSKGVQY----LNEIKDSVVAGFQWADQEGAMAEENLRGVRFNIYDVTLHTDAIH 188
NIL+D + V+ LN +KDS+V GFQW +EG + +E +R V+F I + + + +H
Sbjct: 767 NILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLH 826
Query: 189 RGGGQIIPTTRRCLYACLLTAQPRLME 269
RGGGQIIPT RR +Y+ L A PRLME
Sbjct: 827 RGGGQIIPTARRVVYSAFLMANPRLME 853
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 33.1 bits (72), Expect = 0.031
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Frame = +3
Query: 66 IKDSVVAGFQWADQEGAMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQIIPTT 218
+K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 219 RRCLYACLLTAQPRLME 269
R A +L ++PRL+E
Sbjct: 850 REACQAAILESKPRLVE 866
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 32.3 bits (70), Expect = 0.055
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +3
Query: 66 IKDSVVAGFQWADQEGAMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 221
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 222 RCLYACLLTAQPRLME 269
++ +PRL+E
Sbjct: 875 EACREAVVQNKPRLVE 890
>09_01_0098 + 1486683-1486910
Length = 75
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 95 LEPGDDRVLDLVQVLHTLRAVDEDVS 18
L+PGD+ DLV + LR+VDE +S
Sbjct: 10 LKPGDNNEEDLVLTVAPLRSVDESLS 35
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 200 TATSVNGVSVK-GDVINVESNPSQVLLGHGAFLVGP-LEPGDDRVLDLVQVLHTLRAVD 30
T S+N VK G + ++V+LG P L PGD R+L+ V V VD
Sbjct: 809 TVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD 867
>11_04_0041 - 12690287-12690816,12691087-12691378
Length = 273
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 233 VQASPSRRNDLTATSVNGVSVKGDVINVES 144
+Q + +R N+LT+ +G+S+ G+VI V +
Sbjct: 81 IQVNGNRPNNLTSRICHGISLLGEVIRVST 110
>11_06_0475 - 24042889-24043226,24043621-24043714
Length = 143
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 95 LEPGDDRVLDLVQVLHTLRAVDEDVS 18
L+PGD+ DLV + LR+VDE S
Sbjct: 72 LKPGDNNEEDLVLTVAPLRSVDESPS 97
>01_07_0369 -
43111835-43111882,43112172-43112245,43112670-43112754,
43112930-43113022,43113099-43113163,43114051-43114142,
43114240-43114527,43114642-43114706,43115421-43115502,
43115578-43115669,43116169-43116301,43116380-43116501,
43116624-43116725,43116853-43116892,43117032-43117103,
43117241-43117320,43117444-43117818
Length = 635
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 94 WNPATTESLISFRYCTPLEQSTRMLAS 14
WNPAT + C PL QSTR AS
Sbjct: 264 WNPAT---FLHAYTCLPLAQSTRQAAS 287
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 209 NDLTATSVNGVSVKGDVINVESNPSQVLLGHGAFLVGPLEPGDDRVLDLVQVLHTLRA 36
+D T +K D++ + N + +L G P +PGD DL+ + LRA
Sbjct: 118 SDPVLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLRA 175
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 197 ATSVNGVSVKGDVINVESNPSQVLLGHGAFLVG 99
AT NG +V D++ E+N + +L H A +G
Sbjct: 184 ATEANGANVVKDLLRKENNSKETVL-HQAVCIG 215
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 150 NIYDVTLHTDAIHRGGGQIIPT 215
N+ + +H D +HRG G I P+
Sbjct: 394 NVERLYIHLDMVHRGRGDIDPS 415
>06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781
Length = 389
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 233 VQASPSRRNDLTATSVNGVSVKGDVINVESNPSQVLLGHG 114
V A+P L A+S N S + + ++E S LLG G
Sbjct: 139 VNAAPGIMTFLVASSANNASWETNSTSLEGKDSPALLGGG 178
>02_05_0907 -
32663544-32663623,32663673-32663863,32664065-32664162,
32664406-32664519,32664589-32664646,32664778-32664867,
32665414-32665505,32665898-32666008,32666120-32666374,
32666512-32666577,32666725-32666853
Length = 427
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 112 PSWSAHWNPATTESLISFRYCTPLEQ 35
PSW++H +PA +++ + TP+ +
Sbjct: 25 PSWASHLSPAPSQTFSLGHFPTPIHK 50
>01_01_0953 -
7472173-7472178,7472216-7472311,7472370-7472462,
7472855-7473019,7473689-7474821,7474902-7475426,
7477077-7477249,7478737-7478831,7478893-7481688
Length = 1693
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 15 EANILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEEN 131
E+ +L+D Q ++ DS+VA DQ+GA ++N
Sbjct: 862 ESALLLD-GAAAQTWGKLLDSIVALLSRTDQDGAQQDQN 899
>11_06_0560 -
24978894-24979030,24979106-24979310,24979421-24979748,
24980024-24980116,24980287-24980406,24982786-24982916
Length = 337
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 128 LLGHGAFLVGPLEPGDD 78
LLGH + PLEP +D
Sbjct: 276 LLGHKIYFCSPLEPNED 292
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 191 SVNGVSVKGDVINVESNPSQVLLGHGAFLVGPLEPGDDR 75
+++ V GD+++ + +LG G LV PG++R
Sbjct: 113 AISEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNER 151
>08_01_0648 +
5602454-5602513,5602913-5603000,5603128-5604248,
5605146-5605217,5605218-5605373,5605458-5605748
Length = 595
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 168 LHTDAIHRGGGQIIPT 215
LH D IHRG G I P+
Sbjct: 495 LHLDMIHRGRGDIDPS 510
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 12 HEANILVDCSKGVQYLNEIKDSVVAGFQWADQEGAMAEENL 134
+EA V+ KGV+ ++E D+ + A +EG +A E+L
Sbjct: 561 NEAGCAVE-EKGVETVDEPHDTETNAAENAQEEGVVASEDL 600
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,613,847
Number of Sequences: 37544
Number of extensions: 112600
Number of successful extensions: 373
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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