Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H05
         (271 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   0.67 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   2.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   6.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   6.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   8.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   8.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 0.67
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 200 TATSVNGVSVKGDVIN 153
           ++TS+N ++V+ DVIN
Sbjct: 862 SSTSINSITVEKDVIN 877


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 54  YLNEIKDSVVAGFQWADQ 107
           +LN I   V AG+ W DQ
Sbjct: 153 FLNTIVYCVPAGWIWGDQ 170


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 170 KGDVINVESNPSQ 132
           KG V +VES PS+
Sbjct: 112 KGTVTHVESRPSK 124


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 39  SKGVQYLNEIKDSVVAGFQWADQEGAMAEENLRGV 143
           SK V +LN++    VAGF+  D    M   +LR +
Sbjct: 187 SKLVDFLNDLVAIGVAGFR-VDAAKHMWPSDLRTI 220


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 185 NGVSVKGDVINV 150
           NGVS+KG+ + +
Sbjct: 514 NGVSLKGETVGL 525


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -2

Query: 183 WRQCEG 166
           W+QCEG
Sbjct: 200 WKQCEG 205


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,465
Number of Sequences: 438
Number of extensions: 867
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)