Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H04
         (305 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    27   0.21 
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   0.85 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   3.4  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    22   6.0  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    21   7.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    21   7.9  

>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 125 CGLQHNGLRVK--YGWSDDNVGVDHFFKIPRTISEAYS 232
           C  QH+  R    Y W+  N+ +  F ++  TIS+  S
Sbjct: 112 CQYQHDSCRNTPVYAWAGQNIALAQFSRMTNTISQLIS 149


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 128 GLQHNGLRVKYGWSDDNVGVDH 193
           G ++ GL  + G SDD+ GVD+
Sbjct: 294 GTKNGGLLFELGKSDDDCGVDY 315


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 112 CHGRLWITTQ 141
           C GR WITTQ
Sbjct: 250 CAGRRWITTQ 259


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 166 PTVLYSQSVVL*STNGRGKSEEYNDLHII 80
           PT+++   VVL +  G      Y D +++
Sbjct: 115 PTIVWRPDVVLYNNAGGSDQHHYGDTNVL 143


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 200 KIPRTISEAYSEGWRKISRTPGPIP 274
           KIP+ I  A  E  R  +  PG +P
Sbjct: 39  KIPKPIDNAIMEKCRAENPKPGQMP 63


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 140 NGLRVKYGWSDDNVGVDHFFKIPRTI 217
           NG+ + Y +   NVGV  F +I   I
Sbjct: 81  NGITIVYYYVKPNVGVRQFEEIMERI 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,555
Number of Sequences: 2352
Number of extensions: 6649
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)