Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_H04
         (305 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA...    27   3.4  
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...    26   7.9  
AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA...    26   7.9  
AE013599-2375|AAF57930.1|  155|Drosophila melanogaster CG9013-PA...    26   7.9  

>AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA
           protein.
          Length = 1125

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +2

Query: 119 AVCGLQHNGLRVKYGWSDDNVGVDHFFKIPRTISEAYSEGWRKISRTPGP 268
           AVCGL HNG    Y    D+  +DH        +E +S G R  S +P P
Sbjct: 641 AVCGLLHNG----YDPDPDSDHIDHDPFEGTENNEHHSNGGRPGSVSPAP 686


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p
           protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 190 VNTHVIIRPTVLYSQSVVL 134
           VN H I +PT+LY+ SVV+
Sbjct: 442 VNGHHISQPTILYNGSVVM 460


>AE014296-778|AAX52730.2|  660|Drosophila melanogaster CG33545-PA
           protein.
          Length = 660

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 180 WVLTTSSKSLVPLARLIVKDGG 245
           W+LT   + L PLAR IVKD G
Sbjct: 441 WLLTRRDE-LFPLARQIVKDAG 461


>AE013599-2375|AAF57930.1|  155|Drosophila melanogaster CG9013-PA
           protein.
          Length = 155

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 101 FFALATAVCGLQHNGLRVKYGWSDDNVGVDHF-FKIPRTISEA 226
           FF +  AVC +  + L   YG +  +VG+     K P+ I +A
Sbjct: 13  FFCILGAVCAIVFSTLGAAYGTAKASVGISSMSIKHPQLIMKA 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,288,098
Number of Sequences: 53049
Number of extensions: 306807
Number of successful extensions: 609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)