Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_H03
(226 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 29 0.063
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 1.3
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 24 2.4
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 2.4
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 24 2.4
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 24 3.1
SPBC15D4.04 |gpt2|gpt, alg7|UDP-N-acetylglucosamine--dolichyl-ph... 23 4.1
SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|c... 23 5.4
SPBC19C2.06c |mug124||sequence orphan|Schizosaccharomyces pombe|... 23 5.4
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 23 7.2
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 23 7.2
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 22 9.5
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 22 9.5
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 22 9.5
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 22 9.5
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 29.5 bits (63), Expect = 0.063
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 199 FFTSILGFYSVSCLYLIRKCY 137
+ TS +GF+S CL +++CY
Sbjct: 257 YITSFMGFFSTLCLLFMKECY 277
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 212 RVCFFLYFYSWILQC 168
RVC F + Y WIL C
Sbjct: 99 RVCTFHHEYPWILSC 113
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 200 FLYFYSWILQCFLPLFDPQVLF 135
+ YF+ I+ F+PLF P+V +
Sbjct: 194 WFYFFITIVGNFIPLFTPRVWY 215
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 208 SVSFFTSILGFYSVSCLYLIRKCYFY 131
+V + T+++GF S+ + LI YFY
Sbjct: 478 NVHWATAVVGFASLPLIALIYALYFY 503
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 24.2 bits (50), Expect = 2.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -1
Query: 226 FFIIIESVSFFTSILGFYSVSCLYLIRK--CYFYRLVKALT--F*LFPFYVNDRILKY 65
F II + +ILG S++ LYLI K + L+ + F ++PF L Y
Sbjct: 552 FVAIISTRGNCEAILGILSIALLYLIEKKSVWLASLILGFSVHFKIYPFMYGIAFLVY 609
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 23.8 bits (49), Expect = 3.1
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -3
Query: 182 WILQCFLPLFDPQVLFLPTCEGFNFL--TFPILCKRSYIKIYLY*SN 48
WIL +LPLF P+ FN + T +L IYL+ N
Sbjct: 88 WILDTYLPLFKKSNNAYPSKIAFNPISNTTLVLFLTECCNIYLFSEN 134
>SPBC15D4.04 |gpt2|gpt,
alg7|UDP-N-acetylglucosamine--dolichyl-phosphateN-
acetylglucosaminephosphotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 27 FYKYLVPNY 1
FYKYLVPN+
Sbjct: 93 FYKYLVPNH 101
>SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 374
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 206 CFFLYFYSWILQ 171
CFFLY +S+I Q
Sbjct: 58 CFFLYVFSFITQ 69
>SPBC19C2.06c |mug124||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 23.0 bits (47), Expect = 5.4
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -3
Query: 206 CFFLYFYSW--ILQCFLPLFDPQVLFLPTCEGFNF 108
C + ++W L CF+ F P FL T F F
Sbjct: 89 CSVMCHFAWSCALPCFVDSFFPSNFFLRTYALFTF 123
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 209 VCFFLYFYSWILQCFLPLFDP--QVLFLPTCEGFNF 108
V +FLY+ WIL L + P + +F + F F
Sbjct: 199 VIWFLYYACWILSEGLNVISPIGEAIFYSILDLFEF 234
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 226 FFIIIESVSFFTSILGFYSVSCLYLIRKCYF 134
F+I +S+ F ++L + + CL + C F
Sbjct: 150 FYIYTKSLDFNENLLKAWEIYCLAEAQTCIF 180
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 28 PVSVFITFD**RYI 69
P+S+F+TF+ RYI
Sbjct: 465 PISLFVTFELVRYI 478
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 22.2 bits (45), Expect = 9.5
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 160 LYLIRKCYFY 131
LYL+R+CY Y
Sbjct: 335 LYLLRRCYAY 344
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 22.2 bits (45), Expect = 9.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 182 WILQCFLPLFDPQVLFL 132
W Q F P+ P+V L
Sbjct: 323 WFFQAFCPILKPEVCIL 339
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 140 LFLPTCEGFNFLTFP 96
LFLP+ GF+F T P
Sbjct: 9 LFLPSSVGFSFDTVP 23
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,036
Number of Sequences: 5004
Number of extensions: 14876
Number of successful extensions: 50
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 2,362,478
effective HSP length: 54
effective length of database: 2,092,262
effective search space used: 41845240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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